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Job DescriptionP76176
Confidence99.94%DateThu Jan 5 12:20:09 GMT 2012
Rank85Aligned Residues206
% Identity19%Templated1op0a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  VIGGNE. . . . CDINEHRFLVA. . FFNTTGFFCGGTLINPEWVVTAAHCDSTDF. . . . . . . . QMQLGVHSKKVLNEDEQTR
Template Known Secondary structure 
BS
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TTS
TT..TTTT
GGG

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S
SSS

TT
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   16...20. ........30.. .......40.........50.........60.. .......70.........80.
 
   118.120.........130.........140.........150...... ...160.........170.........180.........190....
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDT
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Template Sequence  NPKEKFICPNKN. . . . . . . . NNEVLDKDIMLIKLDKPISNSKHIAPLSLPSSPPSVGSVCRIMGWGSITPVKETFPDVPY
Template Known Secondary structure 

TT

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BTTB





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   84.....90..... ....100.........110.........120.........130.........140.........150.....
 
   195....200.. .......210.........220.........230.........240.........250.........260.
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Query Sequence  LYSHQNCE. . . . . . . . . . . . . VTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVT
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Template Sequence  CANINLLDHAVCQAGYPELLAEYRTLCAGIVQGGKDTCGGDSGGPLIC. . . . NGQFQGIVSYGAHPCGQGPKPGIYTNVF
Template Known Secondary structure 

TT

TTS

TT


B

TT
TT
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SSTT
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   157..160.........170.........180.........190.........200.... .....210.........220.........230..
 
   262.......
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Query Sequence  GFRDKLDQ
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Template Sequence  DYTDWIQR
Template Known Secondary structure  GG
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   233......240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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