Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.92%DateThu Jan 5 12:20:09 GMT 2012
Rank99Aligned Residues202
% Identity18%Templated1nn6a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.75

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   40.........50.........60..... ....70.........80.........90.........100.........110.......
Predicted Secondary structure 














..






















Query SS confidence 

























. .



















































Query Sequence  GHDDRVPVNDTTQSPWDAVGQLETAS. . GNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
Query Conservation 
 
 
  
      

 

  
    ..   





    







                               
Alig confidence 



....

















..






















.........



















Template Conservation 

  ....
   
 

 
 
           
 




   







  .........                    
Template Sequence  GGTE. . . . CKPHSRPYMAYLEIVTSNGPSKFCGGFLIRRNFVLTAAHCAGR. . . . . . . . . SITVTLGAHNITEEEDTWQK
Template Known Secondary structure 

....

TTSSTT
TTS
TT
GGG

S.........S
SBTTS

TT
Template Predicted Secondary structure 

....


















.........








Template SS confidence 















































































   18.20. ........30.........40.........50.........60.... .....70.........80....
 
   118.120.........130.........140.........150...... ...160.........170.........180.........190...
Predicted Secondary structure 





















....
























Query SS confidence 






































. . . .




































Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLD
Query Conservation    
                        




 
  
  ....    
 
               
 
    
       
Alig confidence 















........














....




































Template Conservation                  ........                                                        
Template Sequence  LEVIKQFRHPKYNTST. . . . . . . . LHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTL
Template Known Secondary structure 
TT

TTT........
TT

SS




SS






S





TT




SSS



SB
Template Predicted Secondary structure 






........











































Template SS confidence 















































































   85....90.........100 .........110.........120.........130.........140.........150......
 
   194.....200.........210...... ...220.........230.........240.........250.........260....
Predicted Secondary structure 










.........



















Query SS confidence 






















. . . . . . . . .















































Query Sequence  TLYSHQNCEVTGWAQTSVMSHQC. . . . . . . . . DTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFR
Query Conservation         
               .........


 






     
   



 
 
                    
Alig confidence 






















.........












....

















...









Template Conservation                                       
 



  ....   
 

 
 
      
... 


 
  
 
Template Sequence  QEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTAFKGDSGGPLLC. . . . AGVAQGIVSYGRSDAKPP. . . AVFTRISHYR
Template Known Secondary structure  B

GGGGTTSTT

TTT

TTT





TT
....TT

TT

S
...
Template Predicted Secondary structure 
























....









...
Template SS confidence 















































































   157..160.........170.........180.........190.........200. ........210......... 220.........
 
   265....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  DKLDQ
Query Conservation       
Alig confidence 




Template Conservation   

  
Template Sequence  PWINQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   232....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions