Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.94%DateThu Jan 5 12:20:09 GMT 2012
Rank83Aligned Residues215
% Identity19%Templated1m9ua_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60..... ....70.........80.........90.........100.........110......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETAS. GNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDI
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Template Sequence  VIGGTN. . . . ASPGEFPWQLSQQRQSGSWSHSCGASLLSSTSALSASHCVDGVLPN. . . . . . NIRVIAGLWQQSDTSGTQ
Template Known Secondary structure 
BT
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TTSSTTSSS
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GG......GS
SBTT

TT
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   16...20. ........30.........40.........50.........60....... ..70.........80.....
 
   117..120.........130.........140.........150...... ...160.........170.........180........
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Query Sequence  EGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYP. . . . .
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Template Sequence  TANVDSYTMHENYGAGT. . . . . . ASYSNDIAILHLATSISLGGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDI
Template Known Secondary structure 
TTTT
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   82.......90........ .100.........110.........120.........130.........140.........150.....
 
   189190.........200..... ....210.........220.........230.........240.........250......
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Query Sequence  . EDHLDTLYSHQNCEVTG. . . . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNR
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Template Sequence  LQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGACNGDSGGPLNCP. DGGTRVVGVTSWVVSSGLGACLPDY
Template Known Secondary structure 
B

TTSTT



TT

TTS

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TT
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   155....160.........170.........180.........190.........200........ .210.........220.........230...
 
   257..260.........
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Query Sequence  . . . AISVTGFRDKLDQ
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Template Sequence  PSVYTRVSAYLGWIGD
Template Known Secondary structure 
GGGT
Template Predicted Secondary structure 
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   225....230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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