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Job DescriptionP76176
Confidence99.96%DateThu Jan 5 12:20:09 GMT 2012
Rank48Aligned Residues215
% Identity16%Templated1gvkb_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution0.94

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60..... ....70.........80.........90.........100.........110.....
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETAS. . GNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHD
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Template Sequence  VVGGTE. . . . AQRNSWPSQISLQYRSGSSWAHTCGGTLIRQNWVMTAAHCVDRELT. . . . . FRVVVGEHNLNQNNGTEQY
Template Known Secondary structure 
BT
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TTS
TTTTTT
GGGG
S


.....S
SBTTS

S

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   16...20. ........30.........40.........50.........60....... ..70.........80......
 
   116...120.........130.........140.........150...... ...160.........170.........180.........190
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Query Sequence  IEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPED. .
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Template Sequence  VGVQKIVVHPYWNT. . . . . . . . DDVAAGYDIALLRLAQSVTLNSYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQ
Template Known Secondary structure 
TT

T........T
GGG



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BTTB






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TT

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BSSTT

B
S
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   83......90...... ...100.........110.........120.........130.........140.........150....
 
   191........200..... ....210.........220.........230.........240.........250.... ...
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Query Sequence  . . . . HLDTLYSHQNCEVTG. . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRAD. NRA
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Template Sequence  TLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGDSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVF
Template Known Secondary structure  B



TSTTTTGGG

TT

SSS
B

TT
TT
TT
BTTBSS
TT

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   154.....160.........170.........180.........190.........200.........210.........220.........230...
 
   258.260.........
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Query Sequence  ISVTGFRDKLDQ
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Template Sequence  TRVSAYISWINN
Template Known Secondary structure  GGGS
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   229230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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