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Job DescriptionP76176
Confidence99.94%DateThu Jan 5 12:20:09 GMT 2012
Rank69Aligned Residues204
% Identity17%Templated1eufa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60..... ....70.........80.........90.........100.........110......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETAS. GNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDI
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Template Sequence  IIGGHE. . . . AKPHSRPYMAFLLFKTSGKSHICGGFLVREDFVLTAAHCLGS. . . . . . . . . SINVTLGAHNIMERERTQQ
Template Known Secondary structure 
BS
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TTS
TTSSSSTT
GGG

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SBTTS

TT
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   16...20. ........30.........40.........50.........60... ......70.........80..
 
   117..120.........130.........140.........150.... .....160.........170.........180.........190..
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Query Sequence  EGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNP. . . . PSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHL
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Template Sequence  VIPVRRPIPHPDYNDET. . . . . . . . LANDIMLLKLTRKADITDKVSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDK
Template Known Secondary structure 
TT

TTT........
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BSSTT

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SB
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   82.......90........ .100.........110.........120.........130.........140.........150...
 
   193...... 200.........210.........220.........230.........240.........250.........260
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Query Sequence  DTLYSHQ. . . . . . . . . . . . NCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISV
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Template Sequence  LQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSGGPLVC. . . . NGVAQGIVSYGRNDGTTPD. . . VYTRI
Template Known Secondary structure 
B

TTT
TT

TTTS
TTS

B

TT
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   155....160.........170.........180.........190.........200... ......210.........220.. .....
 
   261........
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Query Sequence  TGFRDKLDQ
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Template Sequence  SSFLSWIHS
Template Known Secondary structure  GGT
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   232.......240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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