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Job DescriptionP76176
Confidence99.93%DateThu Jan 5 12:20:09 GMT 2012
Rank95Aligned Residues209
% Identity20%Templated1eq9a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGKD. . . . APVGKYPYQVS. . LRLSGSHRCGASILDNNNVLTAAHCVDGLSNLNR. . . . . . . LKVHVGTNYLSESGDV
Template Known Secondary structure 
BS
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TTS
TT..TT
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TT
S
GGG.......S
SBTTS

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   16...20. ........30.. .......40.........50.........60...... ...70.........80..
 
   118.120.........130.........140.........150...... ...160.........170.........180.........190....
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDT
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Template Sequence  YDVEDAVVNKNYDDFL. . . . . . . . LRNDVALVHLTNPIKFNDLVQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQ
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TT
BTTT........TB


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BTTB



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   83......90........ .100.........110.........120.........130.........140.........150....
 
   195....200. ........210.........220.........230.........240.........250.........260....
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Query Sequence  LYSHQNC. . . . . . . . . . EVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGFR
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Template Sequence  EIELIVHPQKQCERDQWRVIDSHICTLTKRGEGACHGDSGGPLVA. . . . NGAQIGIVSFGSPCALGEPD. . VYTRVSSFV
Template Known Secondary structure 
SSS

TT


TT
B

TT
TT
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STTTSSS
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   157..160.........170.........180.........190.........200. ........210.........220. ........230
 
   265....270...
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Query Sequence  DKLDQLSQK
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Template Sequence  SWINANLKK
Template Known Secondary structure  TS

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   236...240....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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