Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.95%DateThu Jan 5 12:20:09 GMT 2012
Rank56Aligned Residues215
% Identity16%Templated1ekbb_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGSD. . . . SREGAWPWVVA. . LYFDDQQVCGASLVSRDWLVSAAHCVYGRNMEPS. . KWKAVLGLHMASNLTSPQIET
Template Known Secondary structure 
BS
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TT..TT
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TT

SSGG..GS

BTT



TT
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   16...20. ........30.. .......40.........50.........60...... ...70.........80.......
 
   118.120.........130.........140.........150.... .....160.........170.........180.........190...
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNP. . . . PSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLD
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Template Sequence  RLIDQIVINPHY. . . . . . . . NKRRKNNDIAMMHLEMKVNYTDYIQPICLPEENQVFPPGRICSIAGWGALIYQGSTADVL
Template Known Secondary structure 
TT
........BTTTTBS

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B


TT



TT
SSBSSTTS
B
SB
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   83......90.... .....100.........110.........120.........130.........140.........150....
 
   194... ..200.........210.........220.........230.........240.........250.........260
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Query Sequence  TLYS. . . . . . . . . . . . . HQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISV
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Template Sequence  QEADVPLLSNEKCQQQMPEYNITENMVCAGYEAGGVDSCQGDSGGPLMCQENNRWLLAGVTSFGYQCALPNRP. GVYARV
Template Known Secondary structure  B


TTS


TT

TT


B

TT
TT
TT
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TT

.G
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   156...160.........170.........180.........190.........200.........210.........220........ .230....
 
   261........
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Query Sequence  TGFRDKLDQ
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Template Sequence  PRFTEWIQS
Template Known Secondary structure  GGTT
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   232.......240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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