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Job DescriptionP76176
Confidence99.95%DateThu Jan 5 12:20:09 GMT 2012
Rank55Aligned Residues220
% Identity19%Templated1eaxa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.3

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  VVGGTD. . . . ADEGEWPWQVSLHA. LGQGHICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGV
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BS
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TTSSTT.TTT
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GGGG

BTTB
TT
GGGS

BTT
TTSTT
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   16...20. ........30..... ....40.........50.........60.........70.........80.........90
 
   118.120.........130.........140.........150.........160........ .170.........180.........190...
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDK. . . . AALTAALKAAGRKVTQAGYPEDHLD
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Template Sequence  QERRLKRII. . . . . . SHPFFNDFTFDYDIALLELEKPAEYSSMVRPICLPDASHVFPAGKAIWVTGWGHTQYGGTGALIL
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TT

TTT
TT

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BTTB


B


TT



TT
SSBSSTTS
B
SB
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   81........ 90.........100.........110.........120.........130.........140.........150....
 
   194..... 200.........210.........220.........230. ........240.........250.........260
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Query Sequence  TLYSHQ. . . . . . . . . . . . NCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHT. DDGWQLIGVQSSAPAAKDRWRADNRAISV
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Template Sequence  QKGEIRVINQTTCENLLPQQITPRMMCVGFLSGGVDSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKP. GVYTRL
Template Known Secondary structure 

STTT

TT
TT
SSB

TT
TT

TTS

SSSS
TT

.S
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   156...160.........170.........180.........190.........200.........210.........220........ .230....
 
   261........
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Query Sequence  TGFRDKLDQ
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Template Sequence  PLFRDWIKE
Template Known Secondary structure  GGG
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   232.......240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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