Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.92%DateThu Jan 5 12:20:09 GMT 2012
Rank102Aligned Residues203
% Identity16%Templated1dpoa_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGYT. . . . CQENSVPYQVSLN. . . SGYHFCGGSLINDQWVVSAAHCYKSRI. . . . . . . . . QVRLGEHNINVLEGNEQF
Template Known Secondary structure 
BS
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TT
STT...SSSTT
GGG

SS
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SBTTS

S

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   16...20. ........30.... .....40.........50.........60. ........70.........
 
   118.120.........130.........140.........150...... ...160.........170.........180.........190....
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDT
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Template Sequence  VNAAKIIKHPNFDRKT. . . . . . . . LNNDIMLIKLSSPVKLNARVATVALPSSCAPAGTQCLISGWGNTLSSGVNEPDLLQ
Template Known Secondary structure 
TT

TTT........
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BTTB


B

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SB
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   83......90........ .100.........110.........120.........130.........140.........150....
 
   195....200..... ....210.........220.........230.........240.........250.........260..
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Query Sequence  LYSHQNCEVTG. . . . . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTG
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Template Sequence  CLDAPLLPQADCEASYPGKITDNMVCVGFLEGGKDSCQGDCGGPVVC. . . . NGELQGIVSWGYGCALPDNP. GVYTKVCN
Template Known Secondary structure  B

STTT

TTS
TT
S
B

TT
TT
....TT
SSSS
TT

.GGG
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   157..160.........170.........180.........190.........200... ......210.........220... ......230.
 
   263......
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Query Sequence  FRDKLDQ
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Template Sequence  YVDWIQD
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   234.....240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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