Return to main results Retrieve Phyre Job Id

Job DescriptionP76176
Confidence99.95%DateThu Jan 5 12:20:09 GMT 2012
Rank60Aligned Residues216
% Identity18%Templated1ao5a_
SCOP infoTrypsin-like serine proteases Trypsin-like serine proteases Eukaryotic proteases
Resolution2.60

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
Predicted Secondary structure 





































Query SS confidence 















































































Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
Query Conservation 
 
 
 
  
      

 

  
       





    







                               
Alig confidence 





....










..





























......




















Template Conservation 



  ....
     

 
 ..
       
 




   







    ......                     
Template Sequence  VVGGFN. . . . CEKNSQPWQVA. . VYYQKEHICGGVLLDRNWVLTAAHCYVDQY. . . . . . EVWLGKNKLFQEEPSAQHRLV
Template Known Secondary structure 
BS
....

TTS
TT..TTTT
TT


SS
......S

BSSS

SS


Template Predicted Secondary structure 



....







..










......






Template SS confidence 















































































   16...20. ........30.. .......40.........50.........60.. .......70.........80...
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
Predicted Secondary structure 














































Query SS confidence 















































































Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYS
Query Conservation    
                        




 
  
      
 
               
 
    
           
Alig confidence 















































































Template Conservation                                                                                  
Template Sequence  SKSFPHPGFNMSLLMLQTIPPGADFSDDLMLLRLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTWQKPDDLQC
Template Known Secondary structure 
TTS
GGGGG
SS

TT


TT

SS




SSS






S


TT
S

SS





SB
Template Predicted Secondary structure 
















































Template SS confidence 















































































   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   198.200..... ....210.........220.........230.........240.........250.........260...
Predicted Secondary structure 


..............



























Query SS confidence 







. . . . . . . . . . . . . .

























































Query Sequence  HQNCEVTG. . . . . . . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGF
Query Conservation     
    ..............           


 






     
   



 
 
                   
Alig confidence 







..............























....





























Template Conservation                                     
  


 

  ....   
 

 
 
   
     
 


 
  
Template Sequence  VFITLLPNENCAKVYLQKVTDVMLCAGEMGGGKDTCRDDSGGPLIC. . . . DGILQGTTSYGPVPCGKPGVPAIYTNLIKF
Template Known Secondary structure 

SS


TT
TT
S
B

TT
TT
....TT

SSTT
TT


GGGG
Template Predicted Secondary structure 



















....












Template SS confidence 















































































   158.160.........170.........180.........190.........200... ......210.........220.........230...
 
   264.....
Predicted Secondary structure 
Query SS confidence 





Query Sequence  RDKLDQ
Query Conservation        
Alig confidence 





Template Conservation    

  
Template Sequence  NSWIKD
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 





   235....240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions