Job Description P76176 Confidence 98.48% Date Thu Jan 5 12:20:09 GMT 2012 Rank 164 Aligned Residues 152 % Identity 14% Template c3syjA_ PDB info PDB header:cell adhesion Chain: A: PDB Molecule:adhesion and penetration protein autotransporter; PDBTitle: crystal structure of the haemophilus influenzae hap adhesin Resolution 2.20 Å

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		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L
Query Conservation
Alig confidence															.							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Conservation															.							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template Sequence		A	L	V	E	N	Q	Y	I	V	S	V	A	H	.	N	V	G	Y	T	D	.	.	.	.	.	.	.	.	.	.	V	D	F	G	A	E	G	N	N	P	D	Q	H	R	F	T	Y	K	I	V	K	R	N	N	Y	K	K	D	.	.	.	.	.	.	.	.	N	L	H	P	Y	E	D	D	Y	H	N	P	R	L
Template Known Secondary structure						T	T				B		T	T	.			S				.	.	.	.	.	.	.	.	.	.				S		S	S			G	G	G												B				B	.	.	.	.	.	.	.	.	T	T	B		S		S			B
Template Predicted Secondary structure															.							.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.		.	100	.	.	.	.											.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.									.	.	.	.	.	.	.	140	.	.	.	.	.	.
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.							.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	.	.	.	.	.	.	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	.	.	.	.	.	.	.	.	.
Query Conservation																			.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	K	F	V	T	E	A	A	P	I	D	M	T	S	N	M	N	G	S	T	Y	S	D	R	T	K	Y	P	E	R	V	R	I	G	S	G	R	Q	F	W	R	N	D	Q	D	K	G	D	Q	V	A	G	A	Y	H	Y	L	T	A	G	N	T	H	N	Q	R	G	A	G	N	G	Y	S	Y	L	G	G	D	V	R
Template Known Secondary structure		S	S				S	S					B					B	G	G	G	G	G		T	T	T	S									S							T	T									T	T	S															B	T								T	T
Template Predicted Secondary structure
Template SS confidence
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
												217	.	.	220	.	.	.	.	.	.	.	.	.	230	.			.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	.	.	D	D	G	W	Q	L	I	G	V	Q	S
Query Conservation		.	.	.	.	.	.	.	.	.	.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																.	.
Template Conservation
Template Sequence		K	A	G	E	Y	G	P	L	P	I	A	G	S	K	G	D	S	G	S	P	M	F	I	Y	D	A	E	K	Q	K	W	L	I	N	G	I	L	R
Template Known Secondary structure		S		B	T	T	B	S		B		B			T	T		T	T								T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions