Job Description P76176 Confidence 99.96% Date Thu Jan 5 12:20:09 GMT 2012 Rank 49 Aligned Residues 208 % Identity 20% Template c3s9cA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:vipera russelli proteinase rvv-v gamma; PDBTitle: russell's viper venom serine proteinase, rvv-v in complex with the2 fragment (residues 1533-1546) of human factor v Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E
Query Conservation
Alig confidence								.	.	.	.																																										.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																																										.	.	.	.	.	.	.	.
Template Sequence		V	V	G	G	D	E	.	.	.	.	C	N	I	N	E	H	P	F	L	V	A	L	Y	T	S	A	S	S	T	I	H	C	A	G	A	L	I	N	R	E	W	V	L	T	A	A	H	C	D	R	R	.	.	.	.	.	.	.	.	N	I	R	I	K	L	G	M	H	S	K	N	I	R	N	E	D	E	Q	I	R
Template Known Secondary structure			B	S				.	.	.	.			T	T	S		T	T							T	T													T	T						G	G	G			T	.	.	.	.	.	.	.	.	T						S		S	S	S	S	S			T	T
Template Predicted Secondary structure								.	.	.	.																																										.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.									.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	.	.	.	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T
Query Conservation																																									.	.	.
Alig confidence														.	.	.	.	.	.	.	.																				.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		V	P	R	G	K	Y	F	C	L	N	T	K	.	.	.	.	.	.	.	.	F	P	N	G	L	D	K	D	I	M	L	I	R	L	R	R	P	V	T	Y	S	T	H	I	A	P	V	S	L	P	S	R	S	R	G	V	G	S	R	C	R	I	M	G	W	G	K	I	S	T	T	T	Y	P	D	V	P	H	C	T
Template Known Secondary structure										S	S		S	.	.	.	.	.	.	.	.	S	T	T		G	G	G								S	S					B	T	T	B				B			S	S				T	T								S	S		S	B	T	T	B			S	S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.									.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
		195	.	.	.	.	200	.	.	.	.	.												.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Y	S	H	Q	N	C	E	V	T	G	.	.	.	.	.	.	.	.	.	.	.	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V	T	G	F
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.
Template Conservation																																																.	.	.	.
Template Sequence		N	I	F	I	V	K	H	K	W	C	E	P	L	Y	P	W	V	P	A	D	S	R	T	L	C	A	G	I	L	K	G	G	R	D	T	C	H	G	D	S	G	G	P	L	I	C	.	.	.	.	N	G	E	M	H	G	I	V	A	G	G	S	E	P	C	G	Q	H	L	K	P	A	V	Y	T	K	V	F	D	Y
Template Known Secondary structure								G	G	G	T	T	T	T		T	T	S		T	T	S	S							T	T	S	S		B			T	T		T	T						.	.	.	.	T	T											S	S	T	T		T	T								G	G	G	G
Template Predicted Secondary structure																																																.	.	.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		264	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	K	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	N	W	I	Q	S
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions