Job Description P76176 Confidence 99.68% Date Thu Jan 5 12:20:09 GMT 2012 Rank 130 Aligned Residues 166 % Identity 17% Template c3nziA_ PDB info PDB header:hydrolase/hydrolase substrate Chain: A: PDB Molecule:serine protease htra1; PDBTitle: substrate induced remodeling of the active site regulates htra12 activity Resolution 2.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	C	T	A	T	L	I	A	P	N	.	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F
Query Conservation												.
Alig confidence												.														.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	G	S	G	F	I	V	S	E	D	G	L	I	V	T	N	A	H	V	V	T	N	K	H	.	.	.	.	.	.	.	.	.	.	.	R	V	K	V	E	L	K	N	G	A	T	Y	E	A	K	I	K	D	V	D	E	K	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I
Template Known Secondary structure									S	S	S											S	S		S	.	.	.	.	.	.	.	.	.	.	.							S	S	S					B							T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.												.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.																					250	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.		.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		G	L	I	V	L	R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	.	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S
Query Conservation																																										.
Alig confidence												.																														.
Template Conservation												.
Template Sequence		A	L	I	K	I	D	H	Q	G	K	.	L	P	V	L	L	L	G	R	S	S	E	L	R	P	G	E	F	V	V	A	I	G	S	P	F	S	L	Q	N	T	V	T	T	G	I	V	S	T	T	Q	R	G	G	K	E	L	G	L	R	N	S	D	M	D	Y	I	Q	T	D	A	I	I	N	Y	G	N	S	G	G
Template Known Secondary structure									S	S		.						B			G	G	G			T	T									G	G	G		T	T																		T		S	S										S				T	T		T	T
Template Predicted Secondary structure												.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q	L	S	Q	K
Query Conservation
Alig confidence					.	.	.																			.	.	.	.	.
Template Conservation					.	.	.																			.	.	.	.	.
Template Sequence		P	L	V	.	.	.	N	L	D	G	E	V	I	G	I	N	T	L	K	V	T	A	G	I	.	.	.	.	.	S	F	A	I	P	S	D	K	I	K	K	F	L	T	E	S	H	D	R
Template Known Secondary structure					.	.	.		T	T	S												T	T		.	.	.	.	.
Template Predicted Secondary structure					.	.	.																			.	.	.	.	.
Template SS confidence
		331	.	.				.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.						.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions