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Job DescriptionP76176
Confidence98.87%DateThu Jan 5 12:20:09 GMT 2012
Rank161Aligned Residues166
% Identity15%Templatec3h09B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:immunoglobulin a1 protease; PDBTitle: the structure of haemophilus influenzae iga1 protease
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   71........80.........90.........100.........110.........120.........130.........140....
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Query Sequence  ATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPW. . . . . .
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Template Sequence  ATLINPQYVVGVKHVSNGVSE. . . . . . . . . . LHFGNLNGNMNNGNAKSHRDVSSEENRYFSVEKNEYPTKLNGKAVTTED
Template Known Secondary structure 
TTB
TT

SGGG..........
SSS


TTSTT
S
BTTB
GGGG

B





SS

S
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   87..90.........100....... ..110.........120.........130.........140.........150......
 
   145....150.........160...... ...170.........180....
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Query Sequence  . . . . . . . DFGLIVLRNPPSGITPLPLFEG. . . . . . . DKAALTAALKAAGRKVTQ. . . . . . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  QTQKRREDYYMPRLDKFVTEVAPIEASTASSDAGTYNDQNKYPAFVRLGSGSQFIYKKGDNYSLILNNHEVGGNNLKLVG
Template Known Secondary structure  T

B

SS


SS



B

S

STTGGG
TTT


SS

TT

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   157..160.........170.........180.........190.........200.........210.........220.........230......
 
   185....190.........200.........210.........220.........230.. .......240......
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Query Sequence  . . . . . . . . . . . . . AGYPEDHLDTLYSHQNCEVTGWAQTSVMSHQCDTLPGDSGSPLMLHTD. . DGWQLIGVQSSAPA
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Template Conservation          
                                        




 
   
    

           
Template Sequence  DAYTYGIAGTPYKVNHENNGLIGFGNSKEEHSDPKGILSQDPLTNYAVLGDSGSPLFVYDREKGKWLFLGSYDFWAG
Template Known Secondary structure 
SSS

B
SS

STT
TT


SS
TTGGGSSTTB
B

TT
TT
TTTT
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   237..240.........250.........260.........270.........280.........290.........300.........310...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
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