Job Description P76176 Confidence 99.94% Date Thu Jan 5 12:20:09 GMT 2012 Rank 66 Aligned Residues 204 % Identity 15% Template c3fzzB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:granzyme c; PDBTitle: structure of grc Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
Predicted Secondary structure																										.	.
Query SS confidence																										.	.
Query Sequence		F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	.	.	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D
Query Conservation																										.	.
Alig confidence								.	.	.	.															.	.																												.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template Sequence		I	I	G	G	N	E	.	.	.	.	I	S	P	H	S	R	P	Y	M	A	Y	Y	E	F	L	K	V	G	G	K	K	M	F	C	G	G	F	L	V	R	D	K	F	V	L	T	A	A	H	C	K	G	R	.	.	.	.	.	.	.	.	.	S	M	T	V	T	L	G	A	H	N	I	K	A	K	E	E	T	Q
Template Known Secondary structure			B	T				.	.	.	.			T	T	S	S	T	T									S	S	S												T	T						T	T					.	.	.	.	.	.	.	.	.							S		S	B	T	T	S			T	T
Template Predicted Secondary structure								.	.	.	.																																												.	.	.	.	.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.					.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.										70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure																																									.	.	.
Query SS confidence																																									.	.	.
Query Sequence		I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	.	.	.	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L
Query Conservation																																									.	.	.
Alig confidence																				.	.	.	.	.	.	.	.														.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		Q	I	I	P	V	A	K	A	I	P	H	P	D	Y	N	P	D	D	.	.	.	.	.	.	.	.	R	S	N	D	I	M	L	L	K	L	V	R	N	A	K	R	T	R	A	V	R	P	L	N	L	P	R	R	N	A	H	V	K	P	G	D	E	C	Y	V	A	G	W	G	K	V	T	P	D	G	E	F	P	K
Template Known Secondary structure													T	T		B	T	T	T	.	.	.	.	.	.	.	.	T	B	T								S	S					B	T	T	B								T	T					T	T								S	S		S	S	T	T	S				S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.									.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.															.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	L	Y	S	H	Q	N	C	E	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.																			.	.	.
Template Conservation																																																					.	.	.	.																			.	.	.
Template Sequence		T	L	H	E	V	K	L	T	V	Q	K	D	Q	V	C	E	S	Q	F	Q	S	S	Y	N	R	A	N	E	I	C	V	G	D	S	K	I	K	G	A	S	F	E	E	D	S	G	G	P	L	V	C	.	.	.	.	K	R	A	A	A	G	I	V	S	Y	G	Q	T	D	G	S	A	P	.	.	.	Q	V	F	T
Template Known Secondary structure		B								B											T	T	T			T	T	T								S	S		B			T	T	T	T	T	T						.	.	.	.	T	T											T	T		S	S	S	.	.	.
Template Predicted Secondary structure																																																					.	.	.	.																			.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210					.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.	.
		259	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	T	G	F	R	D	K	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	L	S	F	V	S	W	I	K	K
Template Known Secondary structure			G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions