Job Description P76176 Confidence 100.00% Date Thu Jan 5 12:20:09 GMT 2012 Rank 12 Aligned Residues 190 % Identity 19% Template c2xrcD_ PDB info PDB header:immune system Chain: D: PDB Molecule:human complement factor i; PDBTitle: human complement factor i Resolution 2.69 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	L	F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H
Query Conservation
Alig confidence											.	.	.	.												.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.	.												.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	L	L	P	K	L	S	C	G	.	.	.	.	V	K	N	G	D	L	P	W	Q	V	A	.	.	I	K	D	A	S	G	I	T	C	G	G	I	Y	I	G	G	C	W	I	L	T	A	A	H	C	L	R	A	S	K	T	H	R	Y	Q	I	W	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T	T	S						S	.	.	.	.							T	T				.	.				T	T										S	T	T						S	T	T	G	G	G		S	S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure											.	.	.	.												.	.																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		302	.	.	.	.	.	.	.	310					.	.	.	.	.	.	.	.	.	320	.			.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.					.	.	.	.	.	160	.	.	.	.	.	.	.		.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.														.
Query SS confidence																																										.	.	.	.														.
Query Sequence		D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	.	.	.	.	P	S	G	I	T	P	L	P	L	F	E	G	D	.	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E
Query Conservation																																										.	.	.	.														.
Alig confidence																	.	.	.	.	.	.	.	.																		.	.	.	.														.															.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template Sequence		I	V	I	E	Y	V	D	R	I	I	F	H	E	N	Y	.	.	.	.	.	.	.	.	N	A	G	T	Y	Q	N	D	I	A	L	I	E	M	K	K	D	G	N	K	K	D	C	E	L	P	P	A	C	V	P	W	S	P	Y	L	F	Q	P	N	D	T	C	I	V	S	G	W	G	.	.	.	.	.	.	.	.
Template Known Secondary structure														T	T		.	.	.	.	.	.	.	.		S	S	S		T	T											S	T	T									B			S		T	T	S	S		S	S										.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.	.	.
Template SS confidence
		389	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.									.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260
Predicted Secondary structure																		.	.	.	.	.	.	.	.																											.
Query SS confidence																		.	.	.	.	.	.	.	.																											.
Query Sequence		D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	.	.	.	.	.	.	.	.	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	.	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V
Query Conservation																		.	.	.	.	.	.	.	.																											.
Alig confidence		.	.	.	.													.	.	.	.	.	.	.	.															.	.	.										.																							.
Template Conservation		.	.	.	.																																			.	.	.																																	.
Template Sequence		.	.	.	.	E	V	K	L	I	S	N	C	S	K	F	Y	G	N	R	F	Y	E	K	E	M	E	C	A	G	T	Y	D	G	S	I	D	A	C	.	.	.	S	G	G	P	L	V	C	M	D	A	N	N	V	T	Y	V	W	G	V	V	S	W	G	E	N	C	G	K	P	E	F	P	.	G	V	Y	T	K	V
Template Known Secondary structure		.	.	.	.						S		T	T	T	T	S	S	T	T			T	T	T								S	S						.	.	.										T	T	S												S	T	T	T	S	T	T			.						G
Template Predicted Secondary structure		.	.	.	.																																			.	.	.																																	.
Template SS confidence
						470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.				.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.		.	.	.	.	540	.
		261	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	F	R	D	K	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	N	Y	F	D	W	I	S	Y
Template Known Secondary structure		G	G	G
Template Predicted Secondary structure
Template SS confidence
		545	.	.	.	.	550	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions