Job Description P76176 Confidence 99.97% Date Thu Jan 5 12:20:09 GMT 2012 Rank 25 Aligned Residues 225 % Identity 20% Template c2vntE_ PDB info PDB header:hydrolase Chain: E: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: urokinase-type plasminogen activator inhibitor complex with2 a 1-(7-sulphoamidoisoquinolinyl)guanidine Resolution 2.2 Å

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		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
Predicted Secondary structure																																				.	.	.
Query SS confidence																																				.	.	.
Query Sequence		V	S	T	L	F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	.	.	.	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R
Query Conservation																																				.	.	.
Alig confidence												.	.	.	.																					.	.	.																												.	.	.	.
Template Conservation												.	.	.	.																																																			.	.	.	.
Template Sequence		Q	K	T	L	I	I	G	G	E	F	.	.	.	.	T	T	I	E	N	Q	P	W	F	A	A	I	Y	R	R	H	R	G	G	S	V	T	Y	V	C	G	G	S	L	M	S	P	C	W	V	I	S	A	T	H	C	F	I	D	Y	P	K	K	E	D	.	.	.	.	Y	I	V	Y	L	G	R	S	R	L	N	S
Template Known Secondary structure								S				.	.	.	.			G	G	G	S	T	T									S	S	S													T	T						G	G	G	G	T	T	S			G	G	G	.	.	.	.						S			B	S	S	S
Template Predicted Secondary structure												.	.	.	.																																																			.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.					.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.					.	.	.	.	.	.	.	70	.	.	.	.
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure																																															.	.	.	.	.	.	.
Query SS confidence																																															.	.	.	.	.	.	.
Query Sequence		Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	.	.	.	.	.	.	.	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T
Query Conservation																																															.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		N	T	Q	G	E	M	K	F	E	V	E	N	L	I	L	H	K	D	Y	S	A	D	T	.	.	.	.	.	.	L	A	H	H	N	D	I	A	L	L	K	I	R	S	K	E	G	R	C	A	Q	P	S	R	T	I	Q	T	I	C	L	P	S	M	Y	N	D	P	Q	F	G	T	S	C	E	I	T	G	F	G	K
Template Known Secondary structure				T	T													T	T					S	.	.	.	.	.	.	S				S										T	T	S						B	T	T	B				B				T	T					T	T								S
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		184	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		Q	A	G	Y	.	.	.	.	.	.	.	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	.	.	.	.	.	.	.	.	.	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A
Query Conservation						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		E	N	S	T	D	Y	L	Y	P	E	Q	L	K	M	T	V	V	K	L	I	S	H	R	E	C	Q	Q	P	H	Y	Y	G	S	E	V	T	T	K	M	L	C	A	A	D	P	Q	W	K	T	D	S	C	Q	G	D	S	G	G	P	L	V	C	S	L	Q	G	R	M	T	L	T	G	I	V	S	W	G	R	G	C
Template Known Secondary structure		S	S	T	T		S	S			S	B															T	S	T	T	T	T	G	G	G			T	T							T	T	S	S					T	T		T	T								T	T												S	S	S
Template Predicted Secondary structure
Template SS confidence
		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		248	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	D	R	W	R	A	D	N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q	L	S	Q	K
Query Conservation
Alig confidence								.
Template Conservation								.
Template Sequence		A	L	K	D	K	P	.	G	V	Y	T	R	V	S	H	F	L	P	W	I	R	S	H	T	K	E
Template Known Secondary structure		S	B	T	T	B		.						G	G	G									T	T
Template Predicted Secondary structure								.
Template SS confidence
		232	.	.	.	.	.		.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions