Job Description P76176 Confidence 96.73% Date Thu Jan 5 12:20:09 GMT 2012 Rank 173 Aligned Residues 148 % Identity 16% Template c2vb0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:polyprotein 3bcd; PDBTitle: crystal structure of coxsackievirus b3 proteinase 3c Resolution 2.40 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V
Query Conservation
Alig confidence												.																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	T	V	K	T	E	Y	G	E	.	F	T	M	L	G	I	Y	D	R	W	A	V	L	P	R	H	.	.	A	K	P	G	P	T	I	L	M	N	D	Q	E	V	G	V	L	D	A	K	E	L	V	D	K	D	G	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T			.								B	T						G	G	.	.	G				S					S	S	S													T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																	.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	.	W	A	Q	T	S	V	M	S	H	Q	C
Query Conservation																																																																						.
Alig confidence		.	.	.	.	.	.	.																																			.	.	.																									.
Template Conservation		.	.	.	.	.	.	.																																			.	.	.
Template Sequence		.	.	.	.	.	.	.	E	L	T	L	L	K	L	N	R	N	E	K	F	R	D	I	R	G	F	L	A	K	E	E	V	E	V	N	E	A	V	L	A	I	.	.	.	N	T	S	K	F	P	N	M	Y	I	P	V	G	Q	V	T	E	Y	G	F	L	N	L	G	G	T	P	T	K	R	M	L	M	Y	N	F
Template Known Secondary structure		.	.	.	.	.	.	.										S			B				G	G	G	S		S	S												.	.	.		S	S	S	S	T	T																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.																																			.	.	.
Template SS confidence
									71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.				.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A
Query Conservation
Alig confidence														.	.	.			.	.
Template Conservation														.	.	.			.	.
Template Sequence		P	T	R	A	G	Q	G	G	V	L	M	S	.	.	.	T	G	.	.	K	V	L	G	I	H	V	G	G
Template Known Secondary structure					T	T								.	.	.	T	T	.	.
Template Predicted Secondary structure														.	.	.			.	.
Template SS confidence
		141	.	.	.	.	.	.	.	.	150	.	.				.	.			.	.	.	.	.	160	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions