Job Description P76176 Confidence 99.96% Date Thu Jan 5 12:20:09 GMT 2012 Rank 41 Aligned Residues 213 % Identity 16% Template c2r0lA_ PDB info PDB header:hydrolase, immune system Chain: A: PDB Molecule:hepatocyte growth factor activator; PDBTitle: short form hgfa with inhibitory fab75 Resolution 2.20 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E
Query Conservation
Alig confidence								.	.	.	.															.	.	.																															.	.	.
Template Conservation								.	.	.	.															.	.	.																															.	.	.
Template Sequence		I	I	G	G	S	S	.	.	.	.	S	L	P	G	S	H	P	W	L	A	A	I	Y	I	.	.	.	G	D	S	F	C	A	G	S	L	V	H	T	C	W	V	V	S	A	A	H	C	F	S	H	S	P	P	R	D	S	.	.	.	V	S	V	V	L	G	Q	H	F	F	N	R	T	T	D	V	T	Q	T	F
Template Known Secondary structure			B	S				.	.	.	.			T	T	S	S	T	T							.	.	.	T	T										T	T						G	G	G	G	T	T				G	G	G	.	.	.						S			B	T	T				S	S
Template Predicted Secondary structure								.	.	.	.															.	.	.																															.	.	.
Template SS confidence
		16	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.				.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.								.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.																																		.	.
Query SS confidence																																								.	.	.	.	.	.	.																																		.	.
Query Sequence		G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	.	.	.	.	.	.	.	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	.	.
Query Conservation																																								.	.	.	.	.	.	.																																		.	.
Alig confidence														.	.	.	.	.	.	.	.																			.	.	.	.	.	.	.																																		.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		G	I	E	K	Y	I	P	Y	T	L	Y	S	.	.	.	.	.	.	.	.	V	F	N	P	S	D	H	D	L	V	L	I	R	L	K	K	K	G	D	R	C	A	T	R	S	Q	F	V	Q	P	I	C	L	P	E	P	G	S	T	F	P	A	G	H	K	C	Q	I	A	G	W	G	H	L	D	E	N	V	S	G
Template Known Secondary structure										T	T			.	.	.	.	.	.	.	.	T	T	S	T	T	T	T										S	S	S		S	S			B	T	T	B				B				T	T					T	T								S			S	S	S	S			S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.									.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
							189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.										.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	.	.	.	.	.	.	.	.	.	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D
Query Conservation		.	.	.	.	.																		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.																		.	.	.	.	.	.	.	.	.																																																	.
Template Conservation																																																																																	.
Template Sequence		Y	S	S	S	L	R	E	A	L	V	P	L	V	A	D	H	K	C	S	S	P	E	V	Y	G	A	D	I	S	P	N	M	L	C	A	G	Y	F	D	C	K	S	D	A	C	Q	G	D	S	G	G	P	L	A	C	E	K	N	G	V	A	Y	L	Y	G	I	I	S	W	G	D	G	C	G	R	L	H	K	P	.
Template Known Secondary structure				S	B								B							T	S	T	T	T	T	G	G	G			T	T					S		S	S	S			B			T	T		T	T								T	T												S	T	T	T		T	T			.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	Y	T	R	V	A	N	Y	V	D	W	I	N	D
Template Known Secondary structure							G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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