Phyre 2 alignment of P76176 with c2pkaB

Job Description P76176
Confidence 98.28% Date Thu Jan 5 12:20:09 GMT 2012

Rank 167 Aligned Residues 128

% Identity 16% Template c2pkaB_

PDB info PDB header:serine proteinase Chain: B: PDB Molecule:kallikrein a; PDBTitle: refined 2 angstroms x-ray crystal structure of porcine2 pancreatic kallikrein a, a specific trypsin-like serine3 proteinase. crystallization, structure determination,4 crystallographic refinement, structure and its comparison5 with bovine trypsin

Resolution 2.05 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.															200
Predicted Secondary structure																			.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	.	.	.	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N
Query Conservation																			.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	D	G	K	D	Y	S	H	D	L	M	L	L	R	L	Q	S	P	A	K	I	T	D	A	V	K	V	L	E	L	P	T	Q	E	P	E	L	G	S	T	C	E	A	S	G	W	G	S	I	E	P	G	P	D	D	F	E	F	P	D	E	I	Q	C	V	Q	L	T	L	L	Q	N	T	F	C	A	D	A	H	P	D
Template Known Secondary structure			S	B		T	T								S	S						S	S								S	S				T	T								S	S		S	S			S	S						S	S																			S	S
Template Predicted Secondary structure
Template SS confidence

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Text version

No model constructed - rank, confidence too low

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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