Job Description P76176 Confidence 100.00% Date Thu Jan 5 12:20:09 GMT 2012 Rank 8 Aligned Residues 210 % Identity 22% Template c2ok5A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement factor b; PDBTitle: human complement factor b Resolution 2.30 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.			.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																.	.
Query SS confidence																.	.
Query Sequence		N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	.	.	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G
Query Conservation																.	.
Alig confidence																.	.																																							.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	D	Y	H	K	Q	P	W	Q	A	K	I	S	V	I	R	P	S	K	G	H	E	S	C	M	G	A	V	V	S	E	Y	F	V	L	T	A	A	H	C	F	T	V	D	D	K	E	H	S	I	K	V	S	V	.	.	.	.	.	.	.	.	.	.	.	.	G	G	E	K	R	D	L	E	I	E	V	V	L	F
Template Known Secondary structure							S	T	T									T	T	S											S	S	S						G	G	G			T	T			G	G	G						.	.	.	.	.	.	.	.	.	.	.	.	T	T		S			B
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		463	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.													.	.	.	520	.	.	.	.	.	.	.	.	.	530
		126	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.				.	.	.	.	160	.	.	.	.	.	.	.																						.	.	170	.	.	.	.	.	.	.	.	.	180
Predicted Secondary structure						.																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	R	L	K	.	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	.	.	.	S	G	I	T	P	L	P	L	F	E	G	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	A	A	L	T	A	A	L	K	A	A	G	R
Query Conservation						.																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																											.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		H	P	N	Y	N	I	N	G	K	K	E	A	G	I	P	E	F	Y	D	Y	D	V	A	L	I	K	L	K	N	K	L	K	Y	G	Q	T	I	R	P	I	C	L	P	C	T	E	G	T	T	R	A	L	R	L	P	P	T	T	T	C	Q	Q	Q	K	E	E	L	L	P	A	Q	D	I	K	A	L	F	V	S	E
Template Known Secondary structure			T	T			T	T	T	T	T	T	T	T		S				T	T								S	S					B	T	T	B				B		S	S	B							T	T			T	T											S		S	S
Template Predicted Secondary structure
Template SS confidence
		531	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610
		181	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.																				.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Query Sequence		K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	G	W	A	Q	T	S	V	M	S	H	.	.	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation
Template Sequence		E	E	K	K	L	T	R	K	E	V	Y	I	K	N	G	D	K	K	G	S	C	E	R	D	A	Q	Y	A	P	G	Y	D	K	V	K	D	I	S	E	V	V	T	P	R	F	L	C	T	G	G	V	S	P	Y	A	D	P	N	T	C	R	G	D	S	G	G	P	L	I	V	H	K	R	S	R	F	I	Q	V	G
Template Known Secondary structure			T	T												S	T	T							G	G	G	G	S	T	T		T	T		S		G	G	G	T	S		T	T						S	S	S	S	S							G	G	G	T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		611	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690
		240	.	.	.	.			.	.	.	.	.	250	.	.	.	.								.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure							.	.											.	.	.	.	.	.	.
Query SS confidence							.	.											.	.	.	.	.	.	.
Query Sequence		V	Q	S	S	A	.	.	P	A	A	K	D	R	W	R	A	D	.	.	.	.	.	.	.	N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q
Query Conservation							.	.											.	.	.	.	.	.	.
Alig confidence							.	.											.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	S	W	G	V	V	D	V	C	K	N	Q	K	R	Q	K	Q	V	P	A	H	A	R	D	F	H	I	N	L	F	Q	V	L	P	W	L	K	E
Template Known Secondary structure							S				G	G	G	T	T	T						T	T								G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		691	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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