Job Description P76176 Confidence 98.08% Date Thu Jan 5 12:20:09 GMT 2012 Rank 168 Aligned Residues 150 % Identity 12% Template c2ijd1_ PDB info PDB header:hydrolase, transferase Chain: 1: PDB Molecule:picornain 3c, rna-directed rna polymerase; PDBTitle: crystal structure of the poliovirus precursor protein 3cd Resolution 3.40 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V
Query Conservation
Alig confidence												.																						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.																						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	V	T	A	T	T	S	K	G	E	.	F	T	M	L	G	V	H	D	N	V	A	I	L	P	T	H	A	S	P	G	E	.	.	S	I	V	I	D	G	K	E	V	A	I	L	A	A	K	A	L	A	D	Q	A	G	T	N	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T	T			.								B	T						G	G	G				S	.	.					T	T														T	T	S				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure												.																						.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.		.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D
Query Conservation
Alig confidence		.	.	.	.	.	.	.											.																																																							.
Template Conservation		.	.	.	.	.	.	.											.																																																							.
Template Sequence		.	.	.	.	.	.	.	E	I	T	I	I	T	L	K	R	N	.	E	K	F	R	D	I	R	P	H	I	P	T	Q	I	T	E	T	N	D	G	V	L	I	V	N	T	S	K	Y	P	N	M	Y	V	P	V	G	A	V	T	E	Q	G	Y	L	N	L	G	G	R	Q	T	A	R	.	T	L	M	Y	N	F	P
Template Known Secondary structure		.	.	.	.	.	.	.									S	S	.			B				G	G	G	S		S	S													S	S	S	S	T	T																	T	T	S					.						S
Template Predicted Secondary structure		.	.	.	.	.	.	.											.																																																							.
Template SS confidence
									71	.	.	.	.	.	.	.	.	80		.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A
Query Conservation
Alig confidence														.	.	.	.
Template Conservation														.	.	.	.
Template Sequence		T	R	A	G	Q	A	G	G	V	I	T	C	.	.	.	.	T	G	K	V	I	G	M	H	V	G	G
Template Known Secondary structure				T	T		T	T						.	.	.	.	T	T
Template Predicted Secondary structure														.	.	.	.
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.					.	.	.	.	.	.	160	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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