|   |
58 | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
V | G | Q | L | E | T | A | S | G | N | L | C | T | A | T | L | I | A | P | N | L | A | L | T | A | G | H | C | L | L | T | P | P | K | G | K | A | D | K | A | V | A | L | R | F | V | S | N | K | G | L | W | R | Y | E | I | H | D | I | E | G | R | V | D | P | T | L | G | K | R | L | K | A | D | G | D | G | W | I | V |
Query Conservation |   |
|   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|   |   |
|   |
|   |   |
|   | . |   |
|
|
|   |
|   |   |   |   |
|
|   |
|   |
|
|   |   |   | . | . |   |   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
I | M | T | I | T | T | S | K | G | E | . |
F | T | G | L | G | I | H | D | R | V | C | V | I | P | T | H | A | Q | P | G | . |
. |
D | D | V | L | V | N | G | Q | K | I | R | V | K | D | K | Y | K | L | V | D | P | E | N | I | N | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |  |  |  | T | T |  |  | . |  |  |  |  |  |  |  | B | T |  |  |  |  |  | S | T | T |
|
|
| . | . | S |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  | . |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
| . | . |
|  |  |  |  |
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
15 | . | . | . | . | 20 | . | . | . | . | |
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | |
|
. | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
138 | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | |
. | . | . | . | 210 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|  |  |
| . |  |  |  |
|
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | P | A | A | A | P | W | D | F | G | L | I | V | L | R | N | P | P | S | G | I | T | P | L | P | L | F | E | G | D | K | A | A | L | T | A | A | L | K | A | A | G | R | K | V | T | Q | A | G | Y | P | E | D | H | L | D | T | L | Y | S | H | Q | N | C | E | V | T | G | . |
W | A | Q | T | S | V | M | S | H | Q | C |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   | . |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
. | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . | . | . | . |
|
|
|
|
|   |
|   |   |   | . |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |
|   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
. |
. |
. |
. |
. |
. |
. |
E | L | T | V | L | T | L | D | R | N | . |
E | K | F | R | D | I | R | G | F | I | S | E | D | L | E | G | V | D | A | T | L | V | V | H | . |
. |
. |
S | N | N | F | T | N | T | I | L | E | V | G | P | V | T | M | A | G | L | I | N | L | S | S | T | P | T | N | R | M | I | R | Y | D | Y |
Template Known Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
| S | . | S |
| B |
|
| G | G | G | T | B |
| S | S |
|
|
| S |  |  |  |  |  |  |  | . | . | . | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |  | S |
Template Predicted Secondary structure |   |
. | . | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
|
|
|
71 | . | . | . | . | . | . | . | . | 80 | |
. | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | |
|
|
. | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . |
  |
  |   |
217 | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
D | T | L | P | G | D | S | G | S | P | L | M | L | H | T | D | D | G | W | Q | L | I | G | V | Q | S | S | A |
Query Conservation |   |
|
|
|   |
|
|
|
|
|
|
|   |   |   |   |   |
|   |   |   |
|
|
|
|   |
|   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |   |
|   |
|
|   |   |
|   | . | . |   |   |
|   | . | . |
|
|
|
|
|   |
|
|
Template Sequence |   |
A | T | K | T | G | Q | C | G | G | V | L | C | . |
. |
A | T | G | K | . |
. |
I | F | G | I | H | V | G | G |
Template Known Secondary structure |   |
|
|
| T | T |
| T | T |
|  |  |  | . | . |  | T | T |  | . | . |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|
|
|
|
|  |  |  | . | . |  |
|
|  | . | . |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
140 | . | . | . | . | . | . | . | . | . | 150 | . | |
|
. | . | . | . | |
|
. | . | . | . | 160 | . | . | . |
  |