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Job DescriptionP76176
Confidence99.94%DateThu Jan 5 12:20:09 GMT 2012
Rank67Aligned Residues205
% Identity19%Templatec2aiqA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:protein c activator; PDBTitle: crystal structure of benzamidine-inhibited protein c activator from2 the venom of copperhead snake agkistrodon contortrix contortrix
Resolution1.54 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  VIGGDE. . . . CNINEHRFLALVYA. . . NGSLCGGTLINQEWVLTARHCDRGNM. . . . . . . . RIYLGMHNLKVLNKDALRR
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   16...20. ........30..... ....40.........50.........60. ........70.........80
 
   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPSGITPLPLFEGDKAALTAALKAAGRKVTQAGYPEDHLDTLYS
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Template Sequence  FPKEKYFCLNTR. . . . . . . . NDTIWDKDIMLIRLNRPVRNSAHIAPLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPH
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   84.....90..... ....100.........110.........120.........130.........140.........150.....
 
   198.200..... ....210.........220.........230.........240.........250.........260...
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Query Sequence  HQNCEVTG. . . . . . . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAKDRWRADNRAISVTGF
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Template Sequence  CANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGPLIC. . . . NGQFQGILSVGGNPCAQPRKPGIYTKVFDY
Template Known Secondary structure 

TT

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TT
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B

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   157..160.........170.........180.........190.........200.. .......210.........220.........230..
 
   264.....
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Query Sequence  RDKLDQ
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Template Sequence  TDWIQS
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   235....240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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