Job Description P76176 Confidence 99.64% Date Thu Jan 5 12:20:09 GMT 2012 Rank 136 Aligned Residues 175 % Identity 14% Template c1zyoA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:serine protease; PDBTitle: crystal structure of the serine protease domain of sesbania mosaic2 virus polyprotein Resolution 2.40 Å

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.		.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	.	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K
Query Conservation																													.
Alig confidence									.																				.																			.	.	.	.	.	.																									.	.	.	.
Template Conservation									.																																							.	.	.	.	.	.																									.	.	.	.
Template Sequence		V	K	A	G	D	E	P	.	A	S	L	V	A	I	K	S	G	P	T	T	I	G	F	G	C	R	T	K	I	E	D	C	L	L	T	A	H	H	V	W	C	N	S	M	R	P	.	.	.	.	.	.	T	G	L	A	K	A	G	K	Q	V	S	V	E	D	W	E	I	S	M	S	S	S	D	K	.	.	.	.
Template Known Secondary structure				T	T		S		.	S	S							T	T																							T	S	S	S			.	.	.	.	.	.						T	T							S										T	.	.	.	.
Template Predicted Secondary structure									.																																							.	.	.	.	.	.																									.	.	.	.
Template SS confidence
		143	.	.	.	.	.	.		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.							.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	L	D	F	A	I	V	R	V	P	T	H	V	W	S	K	L	G	V	K	S	T	P	L	V	C	P	S	S	K	D	V	I	T	C	Y	G	G	S	S	S	D	C	.	.	.	.	.	.	.	.	.	.	L	M	S	G	V	G	S	S	S	T	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T																T						B					S										S	S	T	T	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.	.	.
Template SS confidence
																		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.											.	.	.	260	.	.	.	.	.	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V	T	G	F	R	D	K	L
Query Conservation
Alig confidence																								.	.	.				.																.	.	.	.
Template Conservation																								.	.	.				.																.	.	.	.
Template Sequence		E	F	T	W	K	L	T	H	T	C	P	T	A	A	G	W	S	G	T	P	L	Y	.	.	.	S	S	R	.	G	V	V	G	M	H	V	G	F	E	E	I	G	K	L	.	.	.	.	N	R	G	V	N	M	F	Y	V	A	N	Y	L
Template Known Secondary structure		S	S	T	T										T	T		T	T					.	.	.		S	S	.												T	T	T		.	.	.	.													T
Template Predicted Secondary structure																								.	.	.				.																.	.	.	.
Template SS confidence
		268	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.				290	.	.		.	.	.	.	.	.	.	300	.	.	.	.	.	.	.					.	.	310	.	.	.	.	.	.	.	.	.	320

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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