Job Description P76176 Confidence 99.95% Date Thu Jan 5 12:20:09 GMT 2012 Rank 62 Aligned Residues 213 % Identity 15% Template c1ym0A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:fibrinotic enzyme component b; PDBTitle: crystal structure of earthworm fibrinolytic enzyme component b: a2 novel, glycosylated two-chained trypsin Resolution 2.06 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E
Query Conservation
Alig confidence								.	.	.	.																																													.	.	.	.	.
Template Conservation								.	.	.	.																																													.	.	.	.	.
Template Sequence		I	V	G	G	I	E	.	.	.	.	A	R	P	Y	E	F	P	W	Q	V	S	V	R	R	K	S	S	D	S	H	F	C	G	G	S	I	I	N	D	R	W	V	V	C	A	A	H	C	M	Q	G	E	A	P	.	.	.	.	.	A	L	V	S	L	V	V	G	E	H	D	S	S	A	A	S	T	V	R	Q	T
Template Known Secondary structure			B	S				.	.	.	.			T	T	S	S	T	T							G	G	G	T											T	T										T	T			G	.	.	.	.	.	G	G						S		S	B	T	T	S			S	S
Template Predicted Secondary structure								.	.	.	.																																													.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.						.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.																																			.	.	.	.	.	.
Query SS confidence																																							.	.	.																																			.	.	.	.	.	.
Query Sequence		G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	.	.	.	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	.	.	.	.	.	.
Query Conservation																																							.	.	.																																			.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.																		.	.	.																																			.	.	.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.
Template Sequence		H	D	V	D	S	I	F	V	N	E	N	Y	.	.	.	.	.	.	.	.	D	P	A	T	L	E	N	D	V	S	V	I	K	T	A	V	A	I	T	F	D	I	N	V	G	P	I	C	A	P	D	P	A	N	D	Y	V	Y	R	K	S	Q	C	S	G	W	G	T	I	N	S	G	G	V	C	C	P	A	V	L
Template Known Secondary structure											T	T		.	.	.	.	.	.	.	.		T	T	T		T	T								S	S					S	S	S					B				T	T				T	T								S			S	S	T	T			S			S	B
Template Predicted Secondary structure														.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.									.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		189	190	.	.	.	.	.	.	.	.	.	200	.											.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.																															.
Query SS confidence															.	.	.	.	.	.	.	.	.	.																															.
Query Sequence		E	D	H	L	D	T	L	Y	S	H	Q	N	C	.	.	.	.	.	.	.	.	.	.	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	.	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A
Query Conservation															.	.	.	.	.	.	.	.	.	.																															.
Alig confidence															.	.	.	.	.	.	.	.	.	.																															.																						.	.
Template Conservation																																																																													.	.
Template Sequence		R	Y	V	T	L	N	I	T	T	N	A	F	C	D	A	V	Y	T	S	D	T	I	Y	D	D	M	I	C	A	T	D	N	T	G	M	T	D	R	D	S	C	Q	G	D	S	G	G	P	L	S	V	K	D	G	S	G	I	F	S	L	V	G	I	V	S	W	G	I	G	C	A	S	G	Y	P	.	.	G	V	Y
Template Known Secondary structure																			T	T	S				T	T							S	S		S	S	S		B			T	T	T	T	T								T	T													S	S	S	S	S	S	S		.	.
Template Predicted Secondary structure																																																																													.	.
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230			.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	S	V	T	G	F	R	D	K	L	D	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	R	V	G	F	H	A	G	W	I	T	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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