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Job DescriptionP76176
Confidence99.95%DateThu Jan 5 12:20:09 GMT 2012
Rank62Aligned Residues213
% Identity15%Templatec1ym0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:fibrinotic enzyme component b; PDBTitle: crystal structure of earthworm fibrinolytic enzyme component b: a2 novel, glycosylated two-chained trypsin
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60.........70.........80.........90.........100.........110.......
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Query Sequence  FFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIE
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Template Sequence  IVGGIE. . . . ARPYEFPWQVSVRRKSSDSHFCGGSIINDRWVVCAAHCMQGEAP. . . . . ALVSLVVGEHDSSAASTVRQT
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TTSSTTGGGTTT
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   16...20. ........30.........40.........50.........60..... ....70.........80......
 
   118.120.........130.........140.........150.... .....160.........170.........180........
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Query Sequence  GRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNP. . . PSGITPLPLFEGDKAALTAALKAAGRKVTQAGYP. . . . . .
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Template Sequence  HDVDSIFVNENY. . . . . . . . DPATLENDVSVIKTAVAITFDINVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVL
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   83......90.... .....100.........110.........120.........130.........140.........150....
 
   189190.........200. ........210.........220.........230. ........240.........250.......
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Query Sequence  EDHLDTLYSHQNC. . . . . . . . . . EVTGWAQTSVMSHQCDTLPGDSGSPLMLHT. DDGWQLIGVQSSAPAAKDRWRADNRA
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Template Sequence  RYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSCQGDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYP. . GVY
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   156...160.........170.........180.........190.........200.........210.........220.........230 ...
 
   258.260.........
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Query Sequence  ISVTGFRDKLDQ
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Template Sequence  SRVGFHAGWITD
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   229230.........240
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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