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Job DescriptionP76176
Confidence99.97%DateThu Jan 5 12:20:09 GMT 2012
Rank30Aligned Residues219
% Identity17%Templatec1ybwA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:hepatocyte growth factor activator precursor; PDBTitle: protease domain of hgfa with no inhibitor
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   32.......40.........50.........60.........70.........80.........90.........100.........110.
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Query Sequence  DEVSTLFFGHDDRVPVNDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRY
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Template Sequence  GRRHKKIIGGSS. . . . SLPGSHPWLAAIYI. . . GDSFCAGSLVHTCWVVSAAHCFSHSPPRDS. . . VSVVLGQHFFNRTT
Template Known Secondary structure  S
TT


BS
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TTS
TT...TTTT
GGGTTT


GGG...S

BTT


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   395....400...... ...410.........420 .........430.........440.........450 .........460....
 
   112.......120.........130.........140.........150...... ...160.........170.........180....
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Query Sequence  EIHDIEGRVDPTLGKRLKADGDGWIVPPAAAPWDFGLIVLRNPPS. . . . . . . GITPLPLFEGDKAALTAALKAAGRKVTQ
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Template Sequence  DVTQTFGIEKYIPYTLYS. . . . . . . . VFNPSDHDLVLIRLKKKGDRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHL
Template Known Secondary structure  SS


TT
B........TTB
STT



SSS

S

SSS



B


TT



TT
S

S
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   472.......480......... 490.........500.........510.........520.........530.........540...
 
   185.. ..190.........200..... ....210.........220.........230.........240........
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Query Sequence  AGY. . . . . . . PEDHLDTLYSHQNCEVTG. . . . . . . . . WAQTSVMSHQCDTLPGDSGSPLMLHTDDGWQLIGVQSSAPAAK
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Template Sequence  DENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDCKSDACQGDSGGPLACEKNGVAYLYGIISWGDGCG
Template Known Secondary structure  SSSS
S

SB
B

STTTTTTSS
TTS
SSSSSB

TTTTT
TT




TT
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   544.....550.........560.........570.........580.........590.........600.........610.........620...
 
   249250.........260.........
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Query Sequence  DRWRADNRAISVTGFRDKLDQ
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Template Sequence  RLHKP. GVYTRVANYVDWIND
Template Known Secondary structure  TSSS
.GGGGT
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   624.... .630.........640...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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