Job Description P76176 Confidence 99.97% Date Thu Jan 5 12:20:09 GMT 2012 Rank 35 Aligned Residues 221 % Identity 19% Template c1w0zU_ PDB info PDB header:hydrolase Chain: U: PDB Molecule:urokinase-type plasminogen activator; PDBTitle: urokinase type plasminogen activator Resolution 1.9 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure																																.	.	.
Query SS confidence																																.	.	.
Query Sequence		F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	.	.	.	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H
Query Conservation																																.	.	.
Alig confidence								.	.	.	.																					.	.	.																												.	.	.	.
Template Conservation								.	.	.	.																																																			.	.	.	.
Template Sequence		I	I	G	G	E	F	.	.	.	.	T	T	I	E	N	Q	P	W	F	A	A	I	Y	R	R	H	R	G	G	S	V	T	Y	V	C	G	G	S	L	I	S	P	C	W	V	I	S	A	T	H	C	F	I	D	Y	P	K	K	E	D	.	.	.	.	Y	I	V	Y	L	G	R	S	R	L	N	S	N	T	Q	G
Template Known Secondary structure			B	S	S			.	.	.	.			G	G	G		T	T									S	S	S													T	T						G	G	G	T	T	T				G	G	G	.	.	.	.						S			B	S	S	S			T	T
Template Predicted Secondary structure								.	.	.	.																																																			.	.	.	.
Template SS confidence
		16	.	.	.	20	.					.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.					.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		115	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.									.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.
Query Sequence		D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	G	.	.	.	.	.	.	.	.	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G
Query Conservation																																													.	.	.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.
Template Sequence		E	M	K	F	E	V	E	N	L	I	L	H	K	D	Y	S	A	D	T	.	.	.	.	.	.	L	A	H	H	N	D	I	A	L	L	K	I	R	S	K	E	G	R	C	A	Q	P	S	R	T	I	Q	T	I	S	L	P	S	M	Y	N	D	P	Q	F	G	T	S	C	E	I	T	G	F	G	K	E	N	S	T
Template Known Secondary structure														T	T					S	.	.	.	.	.	.	S				S										T	T	S							S	S					B				T	T					T	T								S			S	S	T	T
Template Predicted Secondary structure																					.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.							.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
								187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.										.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	.	.	.	.	.	.	.	.	.	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W
Query Conservation		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	L	Y	P	E	Q	L	K	M	T	V	V	K	L	I	S	H	R	E	C	Q	Q	P	H	Y	Y	G	S	E	V	T	T	K	M	L	C	A	A	D	P	Q	W	K	T	D	S	C	Q	G	D	S	G	G	P	L	V	C	S	L	Q	G	R	M	T	L	T	G	I	V	S	W	G	R	G	C	A	L	K	D
Template Known Secondary structure			S	S			S	B															T	S	T	T	T	T	G	G	G	S		T	T							T	T	S			B			T	T		T	T								T	T												S	S	S	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	D	N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q	L	S	Q	K
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		K	P	.	G	V	Y	T	R	V	S	H	F	L	P	W	I	R	S	H	T	K	E
Template Known Secondary structure		B		.						G	G	G
Template Predicted Secondary structure				.
Template SS confidence
		224	.		.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions