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Job DescriptionP76176
Confidence100.00%DateThu Jan 5 12:20:09 GMT 2012
Rank7Aligned Residues209
% Identity20%Templatec1rs0A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:complement factor b; PDBTitle: crystal structure analysis of the bb segment of factor b2 complexed with di-isopropyl-phosphate (dip)
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70.........80.........90.........100.........110.........120.......
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Query Sequence  NDTTQSPWDAVGQLETASGNLCTATLIAPNLALTAGHCLLTPPKGKADKAVALRFVSNKGLWRYEIHDIEGRVDPTLGKR
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Template Sequence  TDYHKQPWQAKISVIRKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSV. . . . . . . . . . . . GGEKRDLEIEVVLFHP
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SSS
GGG

TTS
GGG............TT
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T
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   463......470.........480.........490.........500.........510.... .....520.........530
 
   128.130.. .......140.........150...... ...160........ .170.........180...
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Query Sequence  LKADG. DGWIVPPAAAPWDFGLIVLRNPPS. . . GITPLPLFEGDK. . . . . . . . . . . . . . . . . . . . AALTAALKAAGRKVT
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Template Sequence  NYNINGKKEAGIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEE
Template Known Secondary structure  T

TTTTTTTT
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TT

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B
TTBTT

TT

S
SST
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   533......540.........550.........560.........570.........580.........590.........600.........610..
 
   184.....190.........200... ......210.. .......220.........230.........240.
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Query Sequence  QAGYPEDHLDTLYSHQNCEV. . . . . . . . . . . . . . . . . . . . TGWAQTSVM. . SHQCDTLPGDSGSPLMLHTDDGWQLIGVQ
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Template Sequence  KKLTRKEVYIKNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVI
Template Known Secondary structure  T
STTGGGGSTT
TT
SSGGGTS
TTSSSSS





TT
TT
TT
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   613......620.........630.........640.........650.........660.........670.........680.........690..
 
   242.... ...250.........260.........
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Query Sequence  SSAPA. . AKDRWRADNRAISVTGFRDKLDQ
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Template Sequence  SWGVVDVCVPAHAR. DFHINLFQVLPWLKE
Template Known Secondary structure  SS




TT
.GGGG
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   693......700...... ...710.........720.
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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