Job Description P76176 Confidence 99.96% Date Thu Jan 5 12:20:09 GMT 2012 Rank 38 Aligned Residues 202 % Identity 15% Template c1qy6A_ PDB info PDB header:protease Chain: A: PDB Molecule:serine protease; PDBTitle: structue of v8 protease from staphylococcus aureus Resolution 1.90 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.
Predicted Secondary structure																																	.	.	.
Query SS confidence																																	.	.	.
Query Sequence		L	F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	.	.	.	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I
Query Conservation																																	.	.	.
Alig confidence																																	.	.	.																												.	.	.	.
Template Conservation																																																															.	.	.	.
Template Sequence		V	I	L	P	N	N	D	R	H	Q	I	T	D	T	T	N	G	H	Y	A	P	V	T	Y	I	Q	V	E	A	P	T	G	T	F	I	A	S	G	V	V	V	G	K	D	T	L	L	T	N	K	H	V	V	D	A	T	H	G	D	P	H	.	.	.	.	A	L	K	A	F	P	S	A	I	N	Q	D	N	Y	P
Template Known Secondary structure					S								S		T	T	S	G	G	G	T	T									T	T											S	S	S											T	T	T	T		G	G	.	.	.	.	G						T			B	T	T	B		T
Template Predicted Secondary structure																																																															.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
Predicted Secondary structure																																													.	.	.
Query SS confidence																																													.	.	.
Query Sequence		H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	.	.	.	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D
Query Conservation																																													.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	G	F	T	A	E	Q	I	T	K	Y	S	G	.	.	.	.	.	.	.	.	.	.	.	.	E	G	D	L	A	I	V	K	F	S	P	N	E	Q	N	K	H	I	G	E	V	V	K	P	A	T	M	S	N	N	A	E	T	Q	T	N	Q	N	I	T	V	T	G	Y	P	G	D	K	P	V	A	T	M	W
Template Known Secondary structure		T												S	S	.	.	.	.	.	.	.	.	.	.	.	.	S	S											T	T	S							S					B				S	S			T	T										T	T	S	S	T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90													.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V	.	T	G	F	R	D	K	L	D	Q
Query Conservation																																																																								.
Alig confidence																	.	.	.	.	.	.	.	.																.	.	.														.	.	.	.	.												.
Template Conservation																	.	.	.	.	.	.	.	.																.	.	.														.	.	.	.	.
Template Sequence		E	S	K	G	K	I	T	Y	L	K	G	E	A	M	Q	.	.	.	.	.	.	.	.	Y	D	L	S	T	T	G	G	N	S	G	S	P	V	F	.	.	.	N	E	K	N	E	V	I	G	I	H	W	G	G	.	.	.	.	.	V	P	N	E	F	N	G	A	V	F	I	N	E	N	V	R	N	F	L	K	Q
Template Known Secondary structure												T	T				.	.	.	.	.	.	.	.							T	T		T	T					.	.	.		T	T	S										.	.	.	.	.		T	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.																.	.	.														.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.									160	.	.	.	.	.	.	.	.	.	170	.	.	.	.				.	.	.	.	.	180	.	.	.	.	.	.	.						.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		270
Predicted Secondary structure
Query SS confidence
Query Sequence		L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		209

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions