Job Description P76176 Confidence 99.42% Date Thu Jan 5 12:20:09 GMT 2012 Rank 156 Aligned Residues 134 % Identity 19% Template c1lcyA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:htra2 serine protease; PDBTitle: crystal structure of the mitochondrial serine protease htra2 Resolution 2.00 Å

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		68	.	70	.	.	.	.	.	.	.		.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		L	C	T	A	T	L	I	A	P	N	.	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R	F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F
Query Conservation												.
Alig confidence												.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	S	G	F	V	V	A	A	D	G	L	I	V	T	N	A	H	V	V	A	D	R	R	R	V	R	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	L	L	S	G	D	T	Y	E	A	V	V	T	A	V	D	P	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	I
Template Known Secondary structure										T	T	T										T	T		S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T	S												T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.																	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.																.	.
		147	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	L	I	V	L	R	N	P	P	S	G	I	T	P	L	P	L	F	E	G	D	K	A	A	L	T	A	A	L	K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P
Query Conservation
Alig confidence												.																										.	.	.															.	.	.	.	.
Template Conservation												.																										.	.	.															.	.	.	.	.
Template Sequence		A	T	L	R	I	Q	T	K	E	P	.	L	P	T	L	P	L	G	R	S	A	D	V	R	Q	G	E	F	V	V	A	M	G	S	P	F	.	.	.	A	L	Q	N	T	I	T	S	G	I	V	S	S	A	.	.	.	.	.	Q	R	P	N	V	E	Y	I	Q	T	D	A	A	I	D	F	G	N	A	G	G	P
Template Known Secondary structure									S	S		.						B			G	G	G			T	T									T	T	.	.	.	S	S	S	S							B		S		.	.	.	.	.	S										S	S			S	T	T	T	T	T	S
Template Predicted Secondary structure												.																										.	.	.															.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.				.	.	.	.	.	.	.	.	140	.	.	.	.	.						.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q	S	S	A
Query Conservation
Alig confidence				.	.	.
Template Conservation				.	.	.
Template Sequence		L	V	.	.	.	N	L	D	G	E	V	I	G	V	N	T	M	K
Template Known Secondary structure				.	.	.		T	T	S
Template Predicted Secondary structure				.	.	.
Template SS confidence
		177	.				.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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