Job Description P76176 Confidence 83.49% Date Thu Jan 5 12:20:09 GMT 2012 Rank 179 Aligned Residues 53 % Identity 21% Template c1kxfA_ PDB info PDB header:viral protein Chain: A: PDB Molecule:sindbis virus capsid protein; PDBTitle: sindbis virus capsid, (wild-type) residues 1-264,2 tetragonal crystal form (form ii) Resolution 2.38 Å

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		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	Y	P	E	D	H	L	D	T	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	T	D	D	G	W	Q	L	I	G	V	Q
Query Conservation
Alig confidence																																				.										.	.	.
Template Conservation																																				.										.	.	.
Template Sequence		F	T	Y	T	S	E	H	P	E	G	F	Y	N	W	H	H	G	A	V	Q	Y	S	G	G	R	F	T	I	P	R	G	V	G	G	.	R	G	D	S	G	R	P	I	M	.	.	.	D	N	S	G	R	V	V	A	I	V
Template Known Secondary structure		B		B						S						T	T							T	T						T	T	S			.	T	T		T	T					.	.	.		T	T	S
Template Predicted Secondary structure																																				.										.	.	.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220				.	.	.	.	.	.	.	.	.	230

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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