Job Description P76176 Confidence 99.98% Date Thu Jan 5 12:20:09 GMT 2012 Rank 23 Aligned Residues 221 % Identity 16% Template c1elvA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:complement c1s component; PDBTitle: crystal structure of the catalytic domain of human complement c1s2 protease Resolution 1.70 Å

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		22	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	P	D	V	A	R	S	A	N	D	E	V	S	T	L	F	F	G	H	D	D	R	V	P	V	N	D	T	T	Q	S	P	W	D	A	V	G	Q	L	E	T	A	S	G	N	L	C	T	A	T	L	I	A	P	N	L	A	L	T	A	G	H	C	L	L	T	P	P	K	G	K	A	D	K	A	V	A	L	R
Query Conservation
Alig confidence																								.	.	.	.														.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Conservation																								.	.	.	.														.	.	.	.	.																											.	.	.	.	.	.	.	.
Template Sequence		E	L	P	K	C	V	P	V	C	G	V	P	R	E	P	F	I	I	G	G	S	D	.	.	.	.	A	D	I	K	N	F	P	W	Q	V	F	F	D	.	.	.	.	.	N	P	W	A	G	G	A	L	I	N	E	Y	W	V	L	T	A	A	H	V	V	E	G	N	R	E	.	.	.	.	.	.	.	.	P	T
Template Known Secondary structure		S									S			S	S				B	T				.	.	.	.			G	G	G	S	T	T						.	.	.	.	.	T	T									T	T										T	T		S	S	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																								.	.	.	.														.	.	.	.	.																											.	.	.	.	.	.	.	.
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.					.	.	.	.	.	.	430	.	.	.	.	.	.						.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.									.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170				.	.	.	.	.
Predicted Secondary structure																																																									.	.	.															.	.	.
Query SS confidence																																																									.	.	.															.	.	.
Query Sequence		F	V	S	N	K	G	L	W	R	Y	E	I	H	D	I	E	G	R	V	D	P	T	L	G	K	R	L	K	A	D	G	D	G	W	I	V	P	P	A	A	A	P	W	D	F	G	L	I	V	L	R	N	P	P	S	.	.	.	G	I	T	P	L	P	L	F	E	G	D	K	A	A	.	.	.	L	T	A	A	L
Query Conservation																																																									.	.	.															.	.	.
Alig confidence																											.	.	.	.	.	.																									.	.	.															.	.	.
Template Conservation																											.	.	.	.	.	.
Template Sequence		M	Y	V	G	S	T	S	V	Q	K	M	L	T	P	E	H	V	F	I	H	P	G	W	K	L	.	.	.	.	.	.	L	A	V	P	E	G	R	T	N	F	D	N	D	I	A	L	V	R	L	K	D	P	V	K	M	G	P	T	V	S	P	I	C	L	P	G	T	S	S	D	Y	N	L	M	D	G	D	L	G
Template Known Secondary structure					S		S	B														T	T	S			.	.	.	.	.	.		S	S		T	T					T	T								S	S					B	T	T	B				B				S	S	G	G	G				T	T
Template Predicted Secondary structure																											.	.	.	.	.	.
Template SS confidence
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.							.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.
		176	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.					.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.						.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230				.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure																					.	.	.	.																			.	.	.	.	.																			.	.	.
Query SS confidence																					.	.	.	.																			.	.	.	.	.																			.	.	.
Query Sequence		K	A	A	G	R	K	V	T	Q	A	G	Y	P	E	D	H	L	D	T	.	.	.	.	L	Y	S	H	Q	N	C	E	V	T	G	W	A	Q	T	S	V	M	.	.	.	.	.	S	H	Q	C	D	T	L	P	G	D	S	G	S	P	L	M	L	H	.	.	.	T	D	D	G	W	Q	L	I	G	V	Q	S	S
Query Conservation																					.	.	.	.																			.	.	.	.	.																			.	.	.
Alig confidence																					.	.	.	.																			.	.	.	.	.																			.	.	.
Template Conservation
Template Sequence		L	I	S	G	W	G	R	T	E	K	R	D	R	A	V	R	L	K	A	A	R	L	P	V	A	P	L	R	K	C	K	E	V	A	Y	V	F	T	P	N	M	I	C	A	G	G	E	K	G	M	D	S	C	K	G	D	S	G	G	A	F	A	V	Q	D	P	N	D	K	T	K	F	Y	A	A	G	L	V	S	W
Template Known Secondary structure						S				S	S		S	S		S	B																T							T	T							S	T	T		B			T	T		T	T								S	S		T	T
Template Predicted Secondary structure
Template SS confidence
		551	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	A	A	K	D	R	W	R	A	D	N	R	A	I	S	V	T	G	F	R	D	K	L	D	Q
Query Conservation
Alig confidence									.	.	.	.
Template Conservation									.	.	.	.
Template Sequence		G	P	Q	C	G	T	Y	.	.	.	.	G	L	Y	T	R	V	K	N	Y	V	D	W	I	M	K
Template Known Secondary structure			S	S	T	T	S		.	.	.	.						G	G	G	G
Template Predicted Secondary structure									.	.	.	.
Template SS confidence
		641	.	.	.	.	.	.					.	.	650	.	.	.	.	.	.	.	.	.	660	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions