Job Description P0AB12 Confidence 2.19% Date Thu Jan 5 11:14:21 GMT 2012 Rank 29 Aligned Residues 51 % Identity 12% Template c2xseA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:thymine dioxygenase jbp1; PDBTitle: the structural basis for recognition of j-base containing2 dna by a novel dna-binding domain in jbp1 Resolution 1.90 Å

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		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.
Query SS confidence																		.	.
Query Sequence		W	W	L	C	L	M	H	I	A	T	G	I	A	Q	C	I	.	.	S	I	I	G	I	P	V	G	I	A	N	F	K	I	A	A	I	A	L	W	P	V	G	R	R	V	V	S	V	E	T	A	Q	A	A	R	E	A	N	A	R	R	R	F	E
Query Conservation																		.	.
Alig confidence																		.	.																				.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.
Template Sequence		W	I	X	Y	A	V	H	L	S	A	A	C	A	E	E	L	H	X	P	E	V	A	X	S	L	R	K	L	N	V	K	L	K	D	F	N	F	.	.	.	.	.	.	.	.	.	.	D	X	P	P	E	E	K	K	R	R	X	E	R	K	Q	R
Template Known Secondary structure																T	S				T	T	T	T															.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.
Template SS confidence
		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.											.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions