Job Description P0AB12 Confidence 1.01% Date Thu Jan 5 11:14:21 GMT 2012 Rank 99 Aligned Residues 79 % Identity 10% Template c2w8aC_ PDB info PDB header:membrane protein Chain: C: PDB Molecule:glycine betaine transporter betp; PDBTitle: crystal structure of the sodium-coupled glycine betaine2 symporter betp from corynebacterium glutamicum with bound3 substrate Resolution 3.35 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.		90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure																								.							.	.	.	.	.
Query SS confidence																								.							.	.	.	.	.
Query Sequence		N	V	L	L	N	T	G	G	T	V	L	N	I	F	W	L	I	F	F	G	W	W	.	L	C	L	M	H	I	.	.	.	.	.	A	T	G	I	A	Q	C	I	S	I	I	G	I	P	V	G	I	A	N	F	K	I	A	A	I	A	L	W	P	V	G	R	R	V	V	S	V	E	T	A	Q	A	A	R	E	A
Query Conservation																								.							.	.	.	.	.
Alig confidence																								.							.	.	.	.	.
Template Conservation
Template Sequence		Q	H	G	Q	L	E	A	N	K	W	V	T	A	A	W	G	V	A	T	A	A	I	G	L	T	L	L	L	S	G	G	D	N	A	L	S	N	L	Q	N	V	T	I	V	A	A	T	P	F	L	F	V	V	I	G	L	X	F	A	L	V	K	D	L	S	N	D	V	I	Y	L	E	Y	R	E	Q	Q	R	F	N
Template Known Secondary structure		T	T	T		S	S																									G	G	G																																	T
Template Predicted Secondary structure
Template SS confidence
		481	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
		142	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	R	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	L	A	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		561	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions