Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6K1
Confidence99.89%DateThu Jan 5 11:03:19 GMT 2012
Rank17Aligned Residues112
% Identity17%Templated1xuba1
SCOP infoDiaminopimelate epimerase-like Diaminopimelate epimerase-like PhzC/PhzF-like
Resolution1.30

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10... ......20.........30.........40.........50.........60.........70.........80.
Predicted Secondary structure 





.

































Query SS confidence 










.



































































Query Sequence  FSKMHGLGNDF. MVVDAVTQNVFFSPELIRRLADRHLGVGFDQLLVVEPPYDPELDFHYRIFNADGSEVAQCGNGARCFA
Query Conservation 
 
    

  .



            
  
  
   

 
   

            
 
 




   


 
   
Alig confidence 










.


















.......












.












.













Template Conservation 

     






     
    

 



....... 
 


 

    .      

 


 . 
   


 




Template Sequence  FASVPLEGNPVAVFFDADDLPPAQMQRIARE. . . . . . . MNLSESTFVLKPR. NGGDALIRIFTPV. NELPFAGAPLLGTA
Template Known Secondary structure  T
SSTTSS
SGGGS
.......
SS


S.SSSS
SS.
S

Template Predicted Secondary structure 













.......





.






.






Template SS confidence 















































































   10.........20.........30.........40 .........50... ......60...... ...70.........80
 
   82.......90.........100.........110... ......120.....
Predicted Secondary structure 











....







Query SS confidence 































. . . .











Query Sequence  RFVRLKGLTNKRDIRVSTANGRMVLTVTDDDL. . . . VRVNMGEPNFEP
Query Conservation    
   
          
  
 
 
       ....
 
    
    
Alig confidence 





..























....











Template Conservation    
   ..         
 

 
 
           
    
 
    
Template Sequence  IALGAH. . TDNHRLYLETQMGTIAFELERQNGSVIAASMDQPIPTWTA
Template Known Secondary structure  TT..


STTTT








Template Predicted Secondary structure 

..













Template SS confidence 















































   81..... ...90.........100.........110.........120......
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions