Job Description P0A6K1 Confidence 100.00% Date Thu Jan 5 11:03:19 GMT 2012 Rank 2 Aligned Residues 273 % Identity 41% Template c3ekmE_ PDB info PDB header:isomerase Chain: E: PDB Molecule:diaminopimelate epimerase, chloroplastic; PDBTitle: crystal structure of diaminopimelate epimerase form2 arabidopsis thaliana in complex with irreversible inhibitor3 dl-azidap Resolution 2.30 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																								.
Query SS confidence																								.
Query Sequence		M	Q	F	S	K	M	H	G	L	G	N	D	F	M	V	V	D	A	V	T	Q	N	.	V	F	F	S	P	E	L	I	R	R	L	A	D	R	H	L	G	V	G	F	D	Q	L	L	V	V	E	P	P	Y	D	P	E	L	D	F	H	Y	R	I	F	N	A	D	G	S	E	V	A	Q	C	G	N	G	A	R	C
Query Conservation																								.
Alig confidence																								.																															.
Template Conservation																																																							.
Template Sequence		L	H	F	V	K	Y	H	G	L	G	N	D	F	I	L	V	D	N	R	D	S	S	E	P	K	I	T	Q	E	Q	A	A	K	L	C	D	R	N	F	G	V	G	A	D	G	V	I	F	A	M	P	G	V	.	N	G	T	D	Y	A	M	R	I	F	N	S	D	G	S	E	P	E	M	C	G	N	G	V	R	C
Template Known Secondary structure										T	T									T	T		S	S		S	S											T	T	T	S	S			S									S	.	T	T		S								T	T	S				S
Template Predicted Secondary structure																																																							.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.					130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure													.																																								.	.	.	.
Query SS confidence													.																																								.	.	.	.
Query Sequence		F	A	R	F	V	R	L	K	G	L	T	.	N	K	R	D	I	R	V	S	T	A	N	G	R	M	V	L	T	V	T	D	D	D	L	V	R	V	N	M	G	E	P	N	F	E	P	S	A	V	P	.	.	.	.	F	R	A	N	K	A	E	K	T	Y	I	M	R	A	A	E	Q	T	I	L	C	G	V	V	S
Query Conservation													.																																								.	.	.	.
Alig confidence													.																																								.	.	.	.
Template Conservation
Template Sequence		F	A	R	F	I	A	E	L	E	N	L	Q	G	K	H	S	F	T	I	H	T	G	A	G	L	I	V	P	E	I	Q	D	D	G	Q	V	K	V	D	M	G	T	P	I	L	K	A	Q	D	V	P	T	K	L	S	G	N	K	G	E	A	V	V	E	A	E	L	V	V	D	G	V	S	W	N	V	T	C	V	S
Template Known Secondary structure											T			S	S								T	T									T	T	S										B			G	G	G	T	T		S	S			S	B	T	T	B			S						T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		M	G	N	P	H	C	V	I	Q	V	D	D	.	.	.	.	.	.	V	D	T	A	A	V	E	T	L	G	P	V	L	E	S	H	E	R	F	P	E	R	A	N	I	G	F	M	Q	V	V	K	R	E	H	I	R	L	R	V	Y	E	R	G	A	G	E	T	Q	A	C	G	S	G	A	C	A	A	V	A	V	G
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		M	G	N	P	H	C	I	T	F	G	K	K	G	G	P	N	L	K	V	D	D	L	N	L	P	E	I	G	P	K	F	E	H	H	E	M	F	P	A	R	T	N	T	E	F	V	E	V	L	S	R	S	H	L	K	M	R	V	W	E	R	G	A	G	A	T	L	A	C	G	T	G	A	C	A	L	V	V	A	A
Template Known Secondary structure		S	S	S						S	S	B	T	T						G	G	G												T		T	T		T	T												T	T									T	T	T				S
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	Q	G	L	L	A	E	E	V	R	V	E	L	P	G	G	R	L	D	I	A	W	K	G	P	G	H	P	L	Y	M	T	G	P	A	V	H	V	Y	D	G	F	I	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	E	G	R	A	D	R	K	C	T	V	D	L	P	G	G	P	L	E	I	E	W	K	Q	E	D	N	H	I	Y	M	T	G	P	A	E	A	V	F	Y	G	S	A	L	L
Template Known Secondary structure				T	T	S	S		S							T	T									T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		266	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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