Job Description P0A6K1 Confidence 100.00% Date Thu Jan 5 11:03:19 GMT 2012 Rank 1 Aligned Residues 274 % Identity 77% Template c2gkjA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:diaminopimelate epimerase; PDBTitle: crystal structure of diaminopimelate epimerase in complex2 with an irreversible inhibitor dl-azidap Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	Q	F	S	K	M	H	G	L	G	N	D	F	M	V	V	D	A	V	T	Q	N	V	F	F	S	P	E	L	I	R	R	L	A	D	R	H	L	G	V	G	F	D	Q	L	L	V	V	E	P	P	Y	D	P	E	L	D	F	H	Y	R	I	F	N	A	D	G	S	E	V	A	Q	C	G	N	G	A	R	C	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	Q	F	S	K	M	H	G	L	G	N	D	F	V	V	V	D	G	V	T	Q	N	V	F	F	T	P	E	T	I	R	R	L	A	N	R	H	C	G	I	G	F	D	Q	L	L	I	V	E	A	P	Y	D	P	E	L	D	F	H	Y	R	I	F	N	A	D	G	S	E	V	S	Q	C	G	N	G	A	R	C	F
Template Known Secondary structure										T	T									S	S	S															T	T	T	S				S									S	S	T	T	S	S								T	T	S				S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	V	R	L	K	G	L	T	N	K	R	D	I	R	V	S	T	A	N	G	R	M	V	L	T	V	T	D	D	D	L	V	R	V	N	M	G	E	P	N	F	E	P	S	A	V	P	F	R	A	N	K	A	E	K	T	Y	I	M	R	A	A	E	Q	T	I	L	C	G	V	V	S	M	G	N	P	H	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	F	V	T	L	K	G	L	T	N	K	K	D	I	S	V	S	T	Q	K	G	N	M	V	L	T	V	K	D	D	N	Q	I	R	V	N	M	G	E	P	I	W	E	P	A	K	I	P	F	T	A	N	K	F	E	K	N	Y	I	L	R	T	D	I	Q	T	V	L	C	G	A	V	S	M	G	N	P	H	C
Template Known Secondary structure								T	T	S				S							S	S									T	T	S										B			G	G	G	T	T				S	S			S	S						S	S										S	S	S
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	Q	V	D	D	V	D	T	A	A	V	E	T	L	G	P	V	L	E	S	H	E	R	F	P	E	R	A	N	I	G	F	M	Q	V	V	K	R	E	H	I	R	L	R	V	Y	E	R	G	A	G	E	T	Q	A	C	G	S	G	A	C	A	A	V	A	V	G	I	Q	Q	G	L	L	A	E	E	V	R	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	V	Q	V	D	D	I	Q	T	A	N	V	E	Q	L	G	P	L	L	E	S	H	E	R	F	P	E	R	V	N	A	G	F	M	Q	I	I	N	K	E	H	I	K	L	R	V	Y	E	R	G	A	G	E	T	Q	A	C	G	S	G	A	C	A	A	V	A	V	G	I	M	Q	G	L	L	N	N	N	V	Q	V
Template Known Secondary structure						S		T	T	T	S											T		T	T		T	T												T	T									T	T	T				S																T	T	S	S		S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	P	G	G	R	L	D	I	A	W	K	G	P	G	H	P	L	Y	M	T	G	P	A	V	H	V	Y	D	G	F	I	H	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	P	G	G	S	L	M	I	E	W	N	G	V	G	H	P	L	Y	M	T	G	E	A	T	H	I	Y	D	G	F	I	T	L
Template Known Secondary structure				T	T										T	T	S
Template Predicted Secondary structure
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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