Job Description P0A6K1 Confidence 100.00% Date Thu Jan 5 11:03:19 GMT 2012 Rank 11 Aligned Residues 273 % Identity 17% Template c2azpA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein pa1268; PDBTitle: crystal structure of pa1268 solved by sulfur sad Resolution 2.13 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.		.	.	.	.	.					.	20	.	.	.	.	.	.	.	.	.	30	.	.									.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure															.						.	.	.	.															.	.	.	.	.	.	.	.
Query SS confidence															.						.	.	.	.															.	.	.	.	.	.	.	.
Query Sequence		M	Q	F	S	K	M	H	G	L	G	N	D	F	.	M	V	V	D	A	.	.	.	.	V	T	Q	N	V	F	F	S	P	E	L	I	R	R	.	.	.	.	.	.	.	.	L	A	D	R	H	L	G	V	G	F	D	Q	L	L	V	V	E	P	P	Y	D	P	E	L	D	F	H	Y	R	I	F	N	A	D	G
Query Conservation															.						.	.	.	.															.	.	.	.	.	.	.	.
Alig confidence															.						.	.	.	.															.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	R	I	I	D	S	H	T	G	G	E	P	T	R	L	V	I	G	G	F	P	D	L	G	Q	G	D	M	A	E	R	R	R	L	L	G	E	R	H	D	A	W	R	A	A	C	I	L	E	P	R	G	S	D	V	L	V	G	A	L	L	C	A	P	V	D	P	E	A	C	A	G	V	I	F	F	N	N	S	G
Template Known Secondary structure										T	T										S					S	S																						S	T	T	T	S		T	T										S	S	T	T	S	S								S	S	S
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	E	V	A	Q	C	G	N	G	A	R	C	F	A	R	F	V	R	L	K	G	L	T	N	K	R	D	I	R	V	S	T	A	N	G	R	M	V	L	T	V	T	D	D	D	L	V	R	V	N	M	G	E	P	N	F	E	P	S	A	V	P	F	R	A	N	K	A	E	K	T	Y	I	M	R	A	A	E	Q	T
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Y	L	G	M	C	G	H	G	T	I	G	L	V	A	S	L	A	H	L	G	R	I	G	P	G	V	H	R	I	E	T	P	V	G	E	V	E	A	T	L	H	E	D	G	S	V	S	V	R	N	V	P	A	Y	R	Y	R	R	Q	V	S	V	E	V	P	G	I	G	R	V	S	G	D	I	A	W	G	G	N
Template Known Secondary structure		.	B		S																T	T	S			S								T	T									T	T	S							S		B												T	T	T										S	S	S
Template Predicted Secondary structure		.
Template SS confidence
			84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200				.	.	.	.	.	.	.	.	.	210	.	.		.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure																																																							.	.	.													.
Query SS confidence																																																							.	.	.													.
Query Sequence		I	L	C	G	V	V	S	M	G	N	P	H	C	V	I	Q	V	D	D	V	D	T	A	A	V	E	T	L	G	P	V	L	E	S	H	E	R	F	P	E	R	A	N	I	G	F	M	Q	V	V	K	R	E	.	.	.	H	I	R	L	R	V	Y	E	R	G	A	G	.	E	T	Q	A	C	G	S	G	A	C	A
Query Conservation																																																							.	.	.													.
Alig confidence																																																							.	.	.													.
Template Conservation
Template Sequence		W	F	F	L	V	A	G	H	G	Q	R	L	A	G	D	N	L	D	A	L	T	A	Y	T	V	A	V	Q	Q	A	L	D	D	Q	D	I	R	G	E	D	G	G	A	I	D	H	I	E	L	F	A	D	D	P	H	A	D	S	R	N	F	V	L	C	P	G	K	A	Y	D	R	S	P	C	G	T	G	T	S	A
Template Known Secondary structure								S						S	T	T																			T	T		B		T	T	S		B											T	T										T	T	S		B		S	S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.							.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																.	.	.																				.	.	.	.	.	.
Query SS confidence																.	.	.																				.	.	.	.	.	.
Query Sequence		A	V	A	V	G	I	Q	Q	G	L	L	A	E	E	.	.	.	V	R	V	E	L	P	G	G	R	L	D	I	A	W	K	G	P	G	H	.	.	.	.	.	.	P	L	Y	M	T	G	P	A	V	H	V	Y	D	G	F	I	H	L
Query Conservation																.	.	.																				.	.	.	.	.	.
Alig confidence																.	.	.																				.	.	.	.	.	.
Template Conservation
Template Sequence		K	L	A	C	L	A	A	D	G	K	L	L	P	G	Q	P	W	R	Q	A	S	V	I	G	S	Q	F	E	G	R	Y	E	W	L	D	G	Q	P	G	G	P	I	V	P	T	I	R	G	R	A	H	V	S	A	E	A	T	L	L	L
Template Known Secondary structure									T	T	S	S		T	T								T	T	S										G	G	G		T	T	S
Template Predicted Secondary structure
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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