Job Description P20605 Confidence 99.94% Date Thu Jan 5 11:37:48 GMT 2012 Rank 6 Aligned Residues 170 % Identity 12% Template c3eqxB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:fic domain containing transcriptional regulator; PDBTitle: crystal structure of a fic family protein (so_4266) from shewanella2 oneidensis at 1.6 a resolution Resolution 1.60 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.				.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure																																																			.	.	.
Query SS confidence																																																			.	.	.
Query Sequence		N	I	R	Q	Q	Q	R	L	E	Q	A	A	Y	E	M	T	A	L	R	A	A	T	I	E	L	G	P	L	V	R	G	L	P	H	L	R	T	I	H	R	Q	L	Y	Q	D	I	F	D	W	.	.	.	A	G	Q	L	R	E	V	D	I	Y	Q	G	D	T	P	F	C	H	F	A	Y	I	E	K	E	G	N	A
Query Conservation																																																			.	.	.
Alig confidence																																																			.	.	.																					.	.
Template Conservation																																																																										.	.
Template Sequence		D	S	Q	A	D	P	X	T	K	E	A	L	R	Y	R	T	A	L	Y	Q	C	F	T	Q	L	S	N	R	P	L	C	V	T	T	A	L	E	I	C	S	T	I	K	S	V	Q	X	D	V	R	K	V	P	G	T	S	L	T	N	Q	A	T	G	E	V	I	Y	T	P	P	A	G	.	.	E	S	V	I	R	D
Template Known Secondary structure			T	T	S																				G	G	G	T	S			S													T	S						S	S								T	T	T										S	.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.		.	160	.	.	.	.	.	.							.	.	.	170	.	.	.	.
Predicted Secondary structure																																																											.									.	.	.	.	.	.
Query SS confidence																																																											.									.	.	.	.	.	.
Query Sequence		L	M	Q	D	L	E	E	E	G	Y	L	V	G	L	E	K	A	K	F	V	E	R	L	A	H	Y	Y	C	E	I	N	V	L	H	P	F	R	V	G	S	G	L	A	Q	R	I	F	F	E	Q	L	A	I	H	A	G	Y	.	Q	L	S	W	Q	G	I	E	.	.	.	.	.	.	K	E	A	W	N	Q	A	N
Query Conservation																																																											.									.	.	.	.	.	.
Alig confidence												.	.																																														.									.	.	.	.	.	.
Template Conservation												.	.
Template Sequence		L	L	S	N	W	E	A	F	L	H	.	.	N	Q	D	D	V	D	P	L	I	K	X	A	X	A	H	Y	Q	F	E	A	I	H	P	F	I	D	G	N	G	R	T	G	R	V	L	N	I	L	Y	L	I	D	Q	Q	L	L	S	A	P	I	L	Y	L	S	R	Y	I	V	A	H	K	Q	D	Y	Y	R	L	L
Template Known Secondary structure											T	.	.					S																			S	S	S																	T	T	S		S	S	S				T							T
Template Predicted Secondary structure												.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
		175	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		Q	S	G	A	M	.	G	D	L	T	A	L	Q	M	I	F	S	K	V	V	S	E	A	G	E
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	N	V	T	T	Q	Q	E	W	Q	P	W	I	I	F	I	L	N	A	V	E	Q	T	A	K
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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