Job Description P20605 Confidence 10.25% Date Thu Jan 5 11:37:48 GMT 2012 Rank 53 Aligned Residues 63 % Identity 10% Template c2p1nD_ PDB info PDB header:signaling protein Chain: D: PDB Molecule:skp1-like protein 1a; PDBTitle: mechanism of auxin perception by the tir1 ubiqutin ligase Resolution 2.50 Å

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		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure
Query SS confidence
Query Sequence		P	F	R	V	G	S	G	L	A	Q	R	I	F	F	E	Q	L	A	I	H	A	G	Y	Q	L	S	W	Q	G	I	E	K	E	A	W	N	Q	A	N	Q	S	G	A	M	G	D	L	T	A	L	Q	M	I	F	S	K	V	V	S	E	A	G	E	S	E
Query Conservation
Alig confidence																						.	.
Template Conservation																						.	.
Template Sequence		P	L	P	N	V	T	S	K	I	L	A	K	V	I	E	Y	C	K	R	H	.	.	W	D	A	D	F	M	K	I	D	Q	A	T	L	F	E	L	I	L	A	A	N	Y	L	N	I	K	N	L	L	D	L	T	C	Q	T	V	A	D	M	I	K	G	K
Template Known Secondary structure				T	T																	.	.		T	T	T	T	T																		T																	T	T
Template Predicted Secondary structure																						.	.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions