|   |
15 | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | |
|
|
70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | V | K | Y | P | F | A | P | L | E | V | S | P | G | F | R | G | K | P | D | L | M | P | S | Q | C | I | A | C | G | A | C | A | C | A | C | P | A | N | A | L | T | I | Q | T | D | D | Q | Q | N | S | R | T | W | Q | . |
. |
. |
L | Y | L | G | R | C | I | Y | C | G | R | C | E | E | V | C | P | T | R | A | I | Q |
Query Conservation |   |
|   |   |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |
|   |   |   |   | . |   |   |   |   |   |
|   |
|
|   |
|   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |   |
|
|   |
Template Sequence |   |
K | V | Y | G | P | V | E | P | P | V | L | G | . |
I | H | G | T | I | V | G | V | D | F | D | L | C | I | A | D | G | S | C | I | N | A | C | P | V | N | V | F | Q | W | Y | D | T | P | G | H | P | A | S | E | K | K | A | D | P | V | N | E | Q | A | C | I | F | C | M | A | C | V | N | V | C | P | V | A | A | I | D |
Template Known Secondary structure |   |
 |  |  | S |
|
|
|
|
|
|
|
| . |  |  |
| S | S |  |  |  |  | T | T | T |
|
|
|
|
|  |  |  |  |  |
| T | T |
|
|
|  |  |  |  |
| T | T |
| S | S |
| S |  |  |  |  |
| T | T | G | G | G |
|
|
|
|
|  |  |  |  |  |
| T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
20 | . | . | . | . | . | . | . | . | . | 30 | . | |
. | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . |
  |
  |   |
92 | . | . |
Predicted Secondary structure |   |
 |  |
|
Query SS confidence |   |
|
|
|
Query Sequence |   |
L | T | N |
Query Conservation |   |
  |   |   |
Alig confidence |   |
|
|
|
Template Conservation |   |
  |   |
|
Template Sequence |   |
V | K | P |
Template Known Secondary structure |   |
 |
|
|
Template Predicted Secondary structure |   |
 |  |
|
Template SS confidence |   |
|
|
|
  |   |
100 | . | . |
  |