|   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | Y | P | F | A | P | L | E | V | S | P | G | F | R | G | K | P | D | L | M | P | S | Q | C | I | A | C | G | A | C | A | C | A | C | P | A | N | A | L | T | I | Q | T | D | D | Q | Q | N | S | R | T | W | Q | L | Y | L | G | R | C | I | Y | C | G | R | C | E | E | V | C | P | T | R | A | I | Q | L | T | N | N | F |
Query Conservation |   |
  |   |
|   |   |   |   |   |   |
|   |   |
|
|
|   |   |   |
|
|   |   |   |
|
|   |
|
|   |
|   |   |   |
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |
|
|   |   |
|
|   | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |   |   |   |   |
Template Sequence |   |
E | M | H | T | P | D | P | K | A | D | P | D | K | L | H | F | V | Q | I | D | E | A | K | C | I | G | C | D | T | C | S | Q | Y | C | P | T | A | A | I | F | . |
. |
. |
. |
G | E | M | G | E | P | H | S | I | P | H | I | E | A | C | I | N | C | G | Q | C | L | T | H | C | P | E | N | A | I | Y | E | A | Q | S | W |
Template Known Secondary structure |   |
|
|
|
|
|
| T | T |
|
| G | G | G |
|
| S |  |  |  |
| T | T | T |
|
|
|
|
|  |  |  |  |  |
| T | T |
|
|
| B | . | . | . | . |
|
| T | T | S |
|
| B |
|
|
| G | G | G |
|
|
|
|
| T | T | G | G | G |
| T | T |
|
|  |  |  | S |
|
|
|
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  | . | . | . | . |  |
|
|
|
|
|  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
12 | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
. | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . |
  |
  |   |
97 | . | . | 100 | . | . | . | |
|
|
. | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|  | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
E | L | T | V | T | N | K | . |
. |
. |
A | D | L | Y | T | R | A | T | F | H | L | Q | R | C | S | R | C | E | R | P | F | A | . |
. |
. |
. |
. |
. |
P | Q | K | T | I | A | L | A | A | E | L | L | A | Q | Q | Q | N | A | P | Q | N | R | E | M | L | W | A | Q | A | S |
Query Conservation |   |
  |   |
|   |   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|   |
|   | . | . | . | . | . | . |
|   |
|   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|   |
|
|
|
|   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|   |   |
|   |
|
|   |   |
|
|
|
|   |   |   |
|
Template Sequence |   |
V | P | E | V | E | K | K | L | K | D | G | K | V | K | C | I | A | M | P | A | P | A | V | R | Y | A | L | G | D | A | F | G | M | P | V | G | S | V | T | T | G | K | M | L | A | A | L | Q | K | L | G | F | A | H | C | W | D | T | E | F | T | A | D | V | T | I | W | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |
| T | T |
|  |  |  |  |  |  |
| G | G | G | G | G | T | G | G | G | G | G | T |
|
| T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  | T |
| S |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
88 | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
  |