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Job DescriptionP00935
Confidence99.93%DateWed Jan 25 15:20:10 GMT 2012
Rank129Aligned Residues345
% Identity15%Templated2v1pa1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases
Resolution1.9

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  ATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTT
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Template Sequence  DSEDVFIDLLTDSGTGAVTQSMQAAMM. . . . . . . . RGDEAFS. . GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIP
Template Known Secondary structure 
GGG
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SS..S
T

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SSTTT
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   42.......50.........60........ .70..... ....80.........90.........100.........110.
 
   86...90.........100.. .......110.........120..... ....130...... ...140.
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Query Sequence  VFLKPGDLLVAPHDCYG. . . . . GSYRLFDSLAKRGCYRVLFVDQG. . . . . . . . . . . . . . . DEQALRAALAE. . . . KPKLV
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Template Sequence  VLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYI
Template Known Secondary structure 


TTT
SS

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B
TTTT
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TTTT
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   142.......150. ........160.........170.........180......... 190.........
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Query Sequence  LVESPSNPLL. . . . RVVDIAKICHLAREVGAVSVVDNTFLSPALQNPLALGA. . . . . . . . . . . . . . . . . . DLVLHSCTKY
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Template Sequence  VATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKD
Template Known Secondary structure  SSB
GGG
B


TT


TT
GGGTTS
GGG
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   192.......200.........210.........220.........230.........240.........250.........260.........270.
 
   200.........210.........220.........230. ........240........ .250.........260.........270
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Query Sequence  LNGHSDVVAGVVIAKDPDVVTELAWWANNIGV. . . . . . . TGGAFDSYLLLRGLRTL. . VPRMELAQRNAQAIVKYLQTQP
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Template Sequence  AMVPM. . . GGLLCMKDDSFFDVYTECRTLVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEIG
Template Known Secondary structure  T

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SGGG


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   272.... ...280.........290.........300.........310.........320.........330.........340........
 
   271........280.........290.........300.........310.........320.........330.........340.........350
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Query Sequence  LVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEAR
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Template Sequence  VVQ. . . . . QAGGHAAFVDAGKLLPHIPAD. . . . . . . QFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCP. . . .
Template Known Secondary structure 


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STTS
GG.......G


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   350.. .......360.........370... ......380.........390.........400.........410...
 
   351........360........ .370.........380.....
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Query Sequence  AAAGISETLLRISTGIED. GEDLIADLENGFRAANK
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Template Sequence  . . . . . . AELLRLTIPRATYTQTHMDFIIEAFKHVKE
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TTT

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   415....420.........430.........440....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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