Job Description P00935 Confidence 99.93% Date Wed Jan 25 15:20:10 GMT 2012 Rank 129 Aligned Residues 345 % Identity 15% Template d2v1pa1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Beta-eliminating lyases Resolution 1.9

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	I	A	V	R	S	G	L	N	D	D	E	Q	Y	G	C	V	V	P	P	I	H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.								.	.
Template Conservation																													.	.	.	.	.	.	.	.								.	.
Template Sequence		D	S	E	D	V	F	I	D	L	L	T	D	S	G	T	G	A	V	T	Q	S	M	Q	A	A	M	M	.	.	.	.	.	.	.	.	R	G	D	E	A	F	S	.	.	G	S	R	S	Y	Y	A	L	A	E	S	V	K	N	I	F	G	Y	Q	Y	T	I	P	T	H	Q	G	R	G	A	E	Q	I	Y	I	P
Template Known Secondary structure			G	G	G		S				S			T	T		S										T	T	.	.	.	.	.	.	.	.	S					S	S	.	.	S															T			S							S	S	T	T	T
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.								.	.
Template SS confidence
		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.									.	70	.	.	.	.	.			.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.						.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.																.	.	.	.	130	.	.	.	.	.	.					.	.	.	140	.
Predicted Secondary structure																			.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query SS confidence																			.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Query Sequence		V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	.	.	.	.	.	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	.	.	.	.	K	P	K	L	V
Query Conservation																			.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Alig confidence																			.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.
Template Conservation
Template Sequence		V	L	I	K	K	R	E	Q	E	K	G	L	D	R	S	K	M	V	A	F	S	N	Y	F	F	D	T	T	Q	G	H	S	Q	I	N	G	C	T	V	R	N	V	Y	I	K	E	A	F	D	T	G	V	R	Y	D	F	K	G	N	F	D	L	E	G	L	E	R	G	I	E	E	V	G	P	N	N	V	P	Y	I
Template Known Secondary structure															T	T	T						S	S												T	T							B		T	T	T	T		T	T	S			T	T	T	T		B														G	G	G
Template Predicted Secondary structure
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		142	.	.	.	.	.	.	.	150	.					.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.																			190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	E	S	P	S	N	P	L	L	.	.	.	.	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	A	L	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	L	H	S	C	T	K	Y
Query Conservation												.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	T	I	T	S	N	S	A	G	G	Q	P	V	S	L	A	N	L	K	A	M	Y	S	I	A	K	K	Y	D	I	P	V	V	M	D	S	A	R	F	A	E	N	A	Y	F	I	K	Q	R	E	A	E	Y	K	D	W	T	I	E	Q	I	T	R	E	T	Y	K	Y	A	D	M	L	A	M	S	A	K	K	D
Template Known Secondary structure					S	S	B		G	G	G		B																	T	T								T	T													G	G	G	T	T	S										G	G	G		S						S	S	S	T
Template Predicted Secondary structure
Template SS confidence
		192	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.			.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
Predicted Secondary structure																																		.	.	.	.	.	.	.																		.	.
Query SS confidence																																		.	.	.	.	.	.	.																		.	.
Query Sequence		L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	.	.	.	.	.	.	.	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	.	.	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P
Query Conservation																																		.	.	.	.	.	.	.																		.	.
Alig confidence							.	.	.																									.	.	.	.	.	.	.																		.	.
Template Conservation							.	.	.
Template Sequence		A	M	V	P	M	.	.	.	G	G	L	L	C	M	K	D	D	S	F	F	D	V	Y	T	E	C	R	T	L	V	V	Q	E	G	F	P	T	Y	G	G	L	E	G	G	A	M	E	R	L	A	V	G	L	Y	D	G	M	N	L	D	W	L	A	Y	R	I	A	Q	V	Q	Y	L	V	D	G	L	E	E	I	G
Template Known Secondary structure		T			S	S	.	.	.								S	G	G	G													T	T	S	S																					T	T																						T	T
Template Predicted Secondary structure							.	.	.
Template SS confidence
		272	.	.	.	.				.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R
Query Conservation
Alig confidence					.	.	.	.	.																						.	.	.	.	.	.	.																																									.	.	.	.
Template Conservation					.	.	.	.	.																						.	.	.	.	.	.	.																																									.	.	.	.
Template Sequence		V	V	Q	.	.	.	.	.	Q	A	G	G	H	A	A	F	V	D	A	G	K	L	L	P	H	I	P	A	D	.	.	.	.	.	.	.	Q	F	P	A	Q	A	L	A	C	E	L	Y	K	V	A	G	I	R	A	V	E	I	G	S	F	L	L	G	R	D	P	K	T	G	K	Q	L	P	C	P	.	.	.	.
Template Known Secondary structure					.	.	.	.	.				S	S										S	T	T	S		G	G	.	.	.	.	.	.	.	G																						S						B		T	T	T		S	B				S	.	.	.	.
Template Predicted Secondary structure					.	.	.	.	.																						.	.	.	.	.	.	.																																									.	.	.	.
Template SS confidence
		350	.	.						.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.								.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.		.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																				.
Query SS confidence																				.
Query Sequence		A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	.	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation																				.
Alig confidence		.	.	.	.	.	.													.
Template Conservation		.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	A	E	L	L	R	L	T	I	P	R	A	T	Y	T	Q	T	H	M	D	F	I	I	E	A	F	K	H	V	K	E
Template Known Secondary structure		.	.	.	.	.	.										T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.
Template SS confidence
								415	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.

No model constructed - rank, confidence too low