Return to main results Retrieve Phyre Job Id

Job DescriptionP00935
Confidence99.96%DateWed Jan 25 15:20:10 GMT 2012
Rank43Aligned Residues321
% Identity10%Templated2fnua1
SCOP infoPLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4950.........60.........70.........80....... ..90.........100.........110.........120.......
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Query Sequence  RGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVF. LKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDE
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Template Sequence  TQGKRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANMLLESGYTPVFAGIKNDGN
Template Known Secondary structure  SSST
SS
SS


TTS

SSS
TTT


B
TTSS
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   2930.........40.........50.........60.........70.........80.........90.........100........
 
   128.130.........140.........150.........160.........170.........180.... .....190.........200...
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Query Sequence  QALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREVGAVSVVDNTFLSPALQNP. . . . LALGADLVLHSCTKYLNGH
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Template Conservation       
                 
       
  

      

 
 
   
            
    
 
  
 
   
Template Sequence  IDELALEKLINERTKAIVSVDYAGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKPITTA
Template Known Secondary structure  B
GGGSGGG

TT
GGG



T

TT
TT
TTTTSSSS

TTSSS

S
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   109110.........120.........130.........140.........150.........160.........170.........180........
 
   204.....210.........220.... .....230.........240.........250.........260.......
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Query Sequence  SDVVAGVVIAKDPDVVTELAW. . . . . . . . . . . . . . . . WANNIGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQ
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Template Sequence  E. . . GGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRIFK
Template Known Secondary structure  S...
S
TBTTSSSS
SS


B



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   189 190.........200.........210.........220.........230.........240.........250.........260.....
 
   268.270.........280.........290.........300.........310.........320.........330.........340.......
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Query Sequence  TQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAP
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Template Sequence  DNPYFTPLHPLLKDKSSNHL. . . . . . . . . . . YPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQLYQQLFNTAPL
Template Known Secondary structure  T
SSSGGG
SS



S
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GGGGGGTT
B




GGGS




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   266...270.........280..... ....290.........300.........310.........320.........330....
 
   348.350.........360.........370.........380.....
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Query Sequence  EARAAAGISETLLRISTGIEDGEDLIADLENGFRAANK
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Template Sequence  KSAEDFY. . HAEISLPCHANLNLESVQNIAHSVLKTFE
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TT

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   335....340. ........350.........360.........370
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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