Job Description P00935 Confidence 99.94% Date Wed Jan 25 15:20:10 GMT 2012 Rank 93 Aligned Residues 312 % Identity 11% Template d2ch1a1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Cystathionine synthase-like Resolution 2.4

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.				70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
Predicted Secondary structure																										.	.	.
Query SS confidence																										.	.	.
Query Sequence		Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	.	.	.	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V
Query Conservation																										.	.	.
Alig confidence																										.	.	.																																					.	.
Template Conservation																																																																	.	.
Template Sequence		F	H	A	E	L	F	R	T	M	D	E	V	K	D	G	L	R	Y	I	F	Q	T	E	N	R	A	T	M	C	V	S	G	S	A	H	A	G	M	E	A	M	L	S	N	L	L	E	E	G	D	R	V	L	I	A	V	N	G	I	W	A	E	R	.	.	A	V	E	M	S	E	R	Y	G	A	D	V	R	T	I
Template Known Secondary structure		T																				T				S						S	S																T	T								S	S						.	.								T	T
Template Predicted Secondary structure																																																																	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.			.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		123	.	.						.	.	.	.	130	.	.	.	.		.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure					.	.	.	.	.										.																																														.
Query SS confidence					.	.	.	.	.										.																																														.
Query Sequence		D	Q	G	.	.	.	.	.	D	E	Q	A	L	R	A	A	L	.	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S
Query Conservation					.	.	.	.	.										.																																														.
Alig confidence					.	.	.	.	.										.																																														.
Template Conservation
Template Sequence		E	G	P	P	D	R	P	F	S	L	E	T	L	A	R	A	I	E	L	H	Q	P	K	C	L	F	L	T	H	G	D	S	S	S	G	L	L	Q	P	L	E	G	V	G	Q	I	C	H	Q	H	D	C	L	L	I	V	D	A	V	A	S	L	C	G	V	P	F	Y	M	D	K	W	E	I	D	A	V	Y	T	G
Template Known Secondary structure					T	T	S																	S						S			T	T	T	T						T	T								T	T								T	T	T	B	T	T	B				T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		123	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		196	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.														.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I
Query Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation											.	.	.
Template Sequence		A	Q	V	L	G	A	P	P	G	.	.	.	I	T	P	I	S	I	S	P	K	A	L	D	V	I	R	N	R	R	T	K	S	K	V	F	Y	W	D	L	L	L	L	G	N	Y	W	G	C	Y	D	E	P	K	R	Y	H	H	T	V	A	S	N	L	I	F	A	L	R	E	A	L	A	Q	I	A	E	E	G	L
Template Known Secondary structure									S	S	.	.	.																T		S	S			S		G	G	G									T	T		S	S	S
Template Predicted Secondary structure											.	.	.
Template SS confidence
		203	.	.	.	.	.	.	210	.				.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H
Query Conservation
Alig confidence																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	N	Q	I	K	R	R	I	E	C	A	Q	I	L	Y	E	G	L	G	K	M	G	L	D	I	F	V	K	D	P	R	H	R	L	P	T	V	T	G	I	M	I	P	K	G	V	D	W	W	K	V	S	Q	Y	A	M	N	N	F	S	L	E	V	Q	G	G	L	G	P	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																							T			B	S	S		S	G	G	G	B		T	T								T	T																B			B				G	G	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.
		343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.		.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	.	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation																							.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	T	F	G	K	A	W	R	V	G	I	M	G	E	C	S	T	V	Q	K	I	Q	F	Y	L	Y	G	F	K	E	S	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	G	T	T	T								G	G	G		S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions