Job Description P00935 Confidence 99.93% Date Wed Jan 25 15:20:10 GMT 2012 Rank 110 Aligned Residues 327 % Identity 15% Template d2c0ra1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 1.2

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.							.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.					70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.																	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.																	.	.	.	.
Query Sequence		L	N	D	D	E	Q	Y	G	C	V	V	P	P	I	H	L	S	S	T	Y	N	F	T	G	F	N	E	P	R	A	H	D	Y	S	R	R	G	N	P	T	.	.	.	.	.	.	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	.	.	.	.	A	V	L	T	N	T	G	M	S	A	I	H	L	V
Query Conservation																																										.	.	.	.	.	.																	.	.	.	.
Alig confidence																												.														.	.	.	.	.	.																	.	.	.	.
Template Conservation																												.
Template Sequence		Y	N	F	N	A	G	P	A	A	L	P	L	E	V	L	E	R	A	Q	A	E	F	V	D	Y	Q	.	H	T	G	M	S	I	M	E	M	S	H	R	G	A	V	Y	E	A	V	H	N	E	A	Q	A	R	L	L	A	L	L	G	N	P	T	G	Y	K	V	L	F	I	Q	G	G	A	S	T	Q	F	A	M	I
Template Known Secondary structure						S	S	S														T	S	S	S	S	T	.	T	S	S	S		G	G	G	S		T	T	S																		T	T			S	S							S	S
Template Predicted Secondary structure																												.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.		.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																												.	.	.	.	.									.
Query SS confidence																																												.	.	.	.	.									.
Query Sequence		T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G	.	.	.	.	.	D	E	Q	A	L	R	A	A	.	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A
Query Conservation																																												.	.	.	.	.									.
Alig confidence																								.	.																			.	.	.	.	.									.																							.	.
Template Conservation																								.	.																																																							.	.
Template Sequence		P	M	N	F	L	K	E	G	Q	T	A	N	Y	V	M	T	G	S	W	A	S	K	.	.	A	L	K	E	A	K	L	I	G	D	T	H	V	A	A	S	S	E	A	S	N	Y	M	T	L	P	K	L	Q	E	I	Q	L	Q	D	N	A	A	Y	L	H	L	T	S	N	E	T	I	E	G	A	Q	F	K	.	.
Template Known Secondary structure								T	T									S						.	.									S									G	G	G	T	T		S				G	G	G					T	T								S			T	T	T	T				S	.	.
Template Predicted Secondary structure																								.	.																																																							.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.			.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220									.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.	.	.
Query SS confidence																																																																	.	.	.	.	.	.	.	.
Query Sequence		K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	.	.	.	.	.	.	.	.	E	L	A	W	W	A	N	N	I
Query Conservation																																																																	.	.	.	.	.	.	.	.
Alig confidence		.	.	.																												.																																	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																												.
Template Sequence		.	.	.	A	F	P	D	T	G	S	V	P	L	I	G	D	M	S	S	D	I	L	S	R	P	F	D	L	N	Q	.	F	G	L	V	Y	A	G	A	Q	K	N	L	G	P	S	G	V	T	V	V	I	V	R	E	D	L	V	A	E	S	P	K	H	L	P	T	M	L	R	Y	D	T	Y	V	K	N	N	S	L
Template Known Secondary structure		.	.	.	S					T	T	S							T	T	T	T	T	S	S				G	G	G	.		S						T	T	T	T	T			S	S								G	G	G	S	S	S			T	T	S		G	G	G								T	T	T
Template Predicted Secondary structure		.	.	.																												.
Template SS confidence
					161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.		.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																								.	.																																								.
Query SS confidence																								.	.																																								.
Query Sequence		G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	.	.	M	E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	.	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G
Query Conservation																								.	.																																								.
Alig confidence																								.	.																		.	.	.	.	.	.	.	.	.	.													.																.
Template Conservation																																											.	.	.	.	.	.	.	.	.	.																													.
Template Sequence		Y	N	T	P	P	S	F	G	I	Y	M	V	N	E	V	L	K	W	I	E	E	R	G	G	L	E	G	V	Q	Q	A	N	R	K	K	A	S	L	I	Y	D	.	.	.	.	.	.	.	.	.	.	A	I	D	Q	S	G	G	F	Y	R	G	C	V	D	V	D	S	R	S	D	M	N	I	T	F	R	L	A	.
Template Known Secondary structure		S	S																				T	T																			.	.	.	.	.	.	.	.	.	.				T	S	T	T	S	S			S	S		G	G	G	B		S	S							S	.
Template Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.																													.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.											.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		307	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	E	E	L	E	K	E	F	V	K	A	S	E	Q	E	G	F	V	G	L	K	G	H	R	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	G	L	R	A	S	I	Y	N	A	V	P	Y	E	S	C	E	A	L	V	Q	F	M	E	H	F	K	R
Template Known Secondary structure																T	T			S		B			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		S							T	T	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330																										.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions