Job Description P00935 Confidence 99.77% Date Wed Jan 25 15:20:10 GMT 2012 Rank 225 Aligned Residues 283 % Identity 19% Template d2a7va1 SCOP info PLP-dependent transferase-like PLP-dependent transferases GABA-aminotransferase-like Resolution 2.04

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70						.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.
Query SS confidence																												.	.	.	.	.
Query Sequence		D	Y	S	R	R	G	N	P	T	R	D	V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	.	.	.	.	.	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V
Query Conservation																												.	.	.	.	.
Alig confidence																												.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	Y	S	E	G	V	D	E	I	E	L	L	C	Q	R	R	A	L	E	A	F	D	L	D	P	A	Q	W	G	V	N	V	Q	P	Y	S	G	S	P	A	N	L	A	V	Y	T	A	L	L	Q	P	H	D	R	I	M	G	Y	K	L	N	P	K	T	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure								T														T	T			T	T	T								S	S															S									B		T	T	T		S	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure																																																												.	.	.	.	.
Query SS confidence																																																												.	.	.	.	.
Query Sequence		L	F	V	D	Q	G	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	.	.	.	.	.	S	P	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H
Query Conservation																																																												.	.	.	.	.
Alig confidence		.	.	.	.	.																									.																													.	.	.	.	.										.
Template Conservation		.	.	.	.	.																									.																																											.
Template Sequence		.	.	.	.	.	I	D	Y	N	Q	L	A	L	T	A	R	L	F	R	P	R	L	I	I	A	G	T	S	A	.	Y	A	R	L	I	D	Y	A	R	M	R	E	V	C	D	E	V	K	A	H	L	L	A	D	M	A	H	I	S	G	L	V	A	A	K	V	I	P	S	P	F	K	.	H	A	D	I	V	T	T
Template Known Secondary structure		.	.	.	.	.	B															S							S	S	.			S														T	T								G	G	G						T	T	S	S			G	G	G	.	T		S
Template Predicted Secondary structure		.	.	.	.	.																									.																																											.
Template SS confidence
							188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.															.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.				.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query SS confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Query Sequence		S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	.	.	.	R	T	L	V	P	R	M	E	L	A	Q	R
Query Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																																	.	.	.
Template Conservation
Template Sequence		T	T	H	K	T	L	R	G	A	R	S	G	L	I	F	Y	R	K	G	V	K	A	V	D	P	K	T	G	R	E	I	P	Y	T	F	E	D	R	I	N	F	A	V	F	P	S	L	Q	G	G	P	H	N	H	A	I	A	A	V	A	V	A	L	K	Q	A	C	T	P	M	F	R	E	Y	S	L	Q	V	L	K
Template Known Secondary structure			S	S	G	G	G		S		S									S						T	T	T																	T	T	T	T			S																		S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template Sequence		N	A	R	A	M	A	D	A	L	L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	S	L	V	S	G	G	T	D	N	H	L	V	L	V	D	L	R	P	K	G	L	D	G	A	R	A	E	R	V	L	E	L	V	S	I	T	A	N	K	N	T	C	P	G	D	.	R	S	A
Template Known Secondary structure													T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T				G	G	G	S		S	S	S							T	T	T	T													T	T									T	T		.			S
Template Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																.
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.																		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.		400	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.					.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.
Predicted Secondary structure																														.	.	.	.
Query SS confidence																														.	.	.	.
Query Sequence		A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	.	.	.	.	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A
Query Conservation																														.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							.	.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	P	G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	L	G	A	P	A	L	T	S	R	Q	F	R	E	D	D	F	R	R	V	V	D	F	I	D	E	G
Template Known Secondary structure		S	S		S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					S						T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		403	.	.	.	.																		.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions