Job Description P00935 Confidence 99.90% Date Wed Jan 25 15:20:10 GMT 2012 Rank 171 Aligned Residues 286 % Identity 19% Template d1wyub1 SCOP info PLP-dependent transferase-like PLP-dependent transferases Glycine dehydrogenase subunits (GDC-P) Resolution 2.10

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		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.										.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																	.																			.	.	.	.	.	.	.	.	.
Query SS confidence																	.																			.	.	.	.	.	.	.	.	.
Query Sequence		V	V	Q	R	A	L	A	E	L	E	G	G	A	G	A	.	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	.	.	.	.	.	.	.	.	.	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R	V	L	F	V	D	Q	G
Query Conservation																	.																			.	.	.	.	.	.	.	.	.
Alig confidence																	.																			.	.	.	.	.	.	.	.	.																								.	.	.	.
Template Conservation																																																																				.	.	.	.
Template Sequence		E	L	G	E	Y	L	K	A	L	T	G	M	D	A	I	T	L	E	P	A	A	G	A	H	G	E	L	T	G	I	L	I	I	R	A	Y	H	E	D	R	G	E	G	R	T	R	R	V	V	L	V	P	D	S	A	H	G	S	N	P	A	T	A	S	M	A	.	.	.	.	G	Y	Q	V	R	E	I	P	S	G
Template Known Secondary structure												T		S							S	S																			T	T		T	T	T								T	T	S		T									T	.	.	.	.	T								B
Template Predicted Secondary structure																																																																				.	.	.	.
Template SS confidence
		111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.	.	.	.	.
							126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.																																																							.	.
Query SS confidence		.	.	.	.	.																																																							.	.
Query Sequence		.	.	.	.	.	D	E	Q	A	L	R	A	A	L	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	.	.	A	L	Q	N	P	L	A	L	G	A	D	L	V	L	H	S	C	T	K
Query Conservation		.	.	.	.	.																																																							.	.
Alig confidence		.	.	.	.	.																																																							.	.
Template Conservation
Template Sequence		P	E	G	E	V	D	L	E	A	L	K	R	E	L	G	P	H	V	A	A	L	M	L	T	N	P	N	T	L	G	L	F	E	R	R	I	L	E	I	S	R	L	C	K	E	A	G	V	Q	L	Y	Y	D	G	A	N	L	N	A	I	M	G	W	A	R	P	G	D	M	G	F	D	V	V	H	L	N	L	H	K
Template Known Secondary structure		T	T	S	S	B										S	T	T								S	S		T	T	S				T	T												T							G	G	G	G	G	G	T	T	T	T							T		S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		187	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		199	200	.	.	.			.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																									.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	L	N	G	H	.	.	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M
Query Conservation							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.																															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	F	T	V	P	H	G	G	G	G	P	G	S	G	P	V	G	V	K	A	H	L	A	P	Y	L	P	V	P	L	V	E	R	G	E	E	G	F	Y	L	D	F	D	R	P	K	S	I	G	R	V	R	S	F	Y	G	N	F	L	A	L	V	R	A	W	A	Y	I	R	T	L	G	L	E	G	L	K	K	A	A
Template Known Secondary structure		T	T					T	T	S											G	G	G	G	G	G			S							S	S									T	T					S	S	S	T	T	S
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	L	A	Q	R	N	A	Q	A	I	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	A	V	L	N	A	R	Y	L	K	E	L	L	K	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	R	V	P	Y	D	G	P	S	M	H	E	F	V	A	Q	P	P	E	G	F	R	A	L	D	L	A	K	G	L	L	E	L	G	F	H	P	P	T	V	Y	F	P	L
Template Known Secondary structure																		T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T		B		S	S		S	S			S					B		S	T	T													T	T							S		S	T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.																			.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	I	S	H	A	A	T	M	T	H	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	K	E	A	L	M	V	E	P	T	E	T	E	A	K	E	T	L	E	A	F	A	E	A	M	G	A	L	L	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S	T	T								T	T	S																	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								409	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions