Phyre 2 alignment of P00935 with d1wsta1

Job Description P00935
Confidence 99.95% Date Wed Jan 25 15:20:10 GMT 2012

Rank 77 Aligned Residues 308

% Identity 14% Template d1wsta1

SCOP info PLP-dependent transferase-like PLP-dependent transferases AAT-like

Resolution 1.95

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	48	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.									.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.
Predicted Secondary structure							.														.	.	.	.	.	.	.	.
Query SS confidence							.														.	.	.	.	.	.	.	.
Query Sequence	R	R	G	N	P	T	.	R	D	V	V	Q	R	A	L	A	E	L	E	G	.	.	.	.	.	.	.	.	G	A	G	A	V	L	T	N	T	G	M	S	A	I	H	L	V	T	T	V	F	L	K	P	G	D	L	L	V	A	P	H	D	C	Y	G	G	S	Y	R	L	F	D	S	L	A	K	R	G	C	Y	R
Query Conservation							.														.	.	.	.	.	.	.	.
Alig confidence							.														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	Q	Y	G	T	T	K	G	F	T	P	L	R	L	A	L	A	R	W	M	E	K	R	Y	D	I	P	M	S	K	V	E	I	M	T	V	A	G	S	Q	Q	A	L	D	L	I	G	R	V	F	L	N	P	G	D	P	I	V	V	E	A	P	T	Y	L	A	A	I	Q	A	F	K	Y	Y	D	P	E	F	I	S	I
Template Known Secondary structure	S				S	S																						T	T							S	S															T	T								S											T	T
Template Predicted Secondary structure
Template SS confidence
	78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.

	119	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.								.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.																							.	.	.
Query SS confidence																	.	.	.	.	.	.	.																							.	.	.
Query Sequence	V	L	F	V	D	Q	G	D	E	Q	A	L	R	A	A	L	.	.	.	.	.	.	.	A	E	K	P	K	L	V	L	V	E	S	P	S	N	P	L	L	R	V	V	D	I	.	.	.	A	K	I	C	H	L	A	R	E	V	G	A	V	S	V	V	D	N	T	F	L	S	P	A	L	Q	N	P	L	A	L	G
Query Conservation																	.	.	.	.	.	.	.																							.	.	.
Alig confidence																	.	.	.	.	.	.	.																							.	.	.
Template Conservation
Template Sequence	P	L	D	D	K	G	M	R	V	D	L	L	E	E	K	L	E	E	L	R	K	Q	G	K	R	V	K	I	V	Y	T	V	S	T	F	Q	N	P	A	G	V	T	M	S	V	D	R	R	K	K	L	L	E	L	A	N	E	Y	D	F	L	I	V	E	D	G	P	Y	S	E	L	R	Y	S	G	E	P	T	P	P
Template Known Secondary structure				T	T																	T	T											S	S		T	T	T																			T	T								T	T	T	T		B		S	S
Template Predicted Secondary structure
Template SS confidence
	158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

	189							190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence	A	.	.	.	.	.	.	D	L	V	L	H	S	C	T	K	Y	L	N	G	H	S	D	V	V	A	G	V	V	I	A	K	D	P	D	V	V	T	E	L	A	W	W	A	N	N	I	G	V	T	G	G	A	F	D	S	Y	L	L	L	R	G	L	R	T	L	V	P	R	M	E	L	A	Q	R	N	A	Q	A	I
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.
Template Conservation																																.
Template Sequence	I	K	H	F	D	D	Y	G	R	V	I	Y	L	G	T	F	S	K	I	L	A	P	G	F	R	I	G	W	V	A	A	.	H	P	H	L	I	R	K	M	E	I	A	K	Q	S	I	D	L	C	T	N	T	F	G	Q	A	I	A	W	K	Y	V	E	N	G	Y	L	D	E	H	I	P	K	I	I	E	F	Y	K
Template Known Secondary structure	G	G	G	G		S	S	S								S	T	T	T	T		G	G	G								.																	S	S															T	T
Template Predicted Secondary structure																																.
Template SS confidence
	238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.		.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.

	263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	V	K	Y	L	Q	T	Q	P	L	V	K	K	L	Y	H	P	S	L	P	E	N	Q	G	H	E	I	A	A	R	Q	Q	K	G	F	G	A	M	L	S	F	E	L	D	G	D	E	Q	T	L	R	R	F	L	G	G	L	S	L	F	T	L	A	E	S	L	G	G	V	E	S	L	I	S	H	A	A	T	M	T	H
Query Conservation
Alig confidence																							.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.	.	.
Template Sequence	P	R	R	D	A	M	L	E	A	L	E	E	Y	M	P	E	G	V	E	W	T	K	.	.	.	.	.	.	.	.	.	P	E	G	G	M	F	V	R	V	T	L	P	E	G	.	I	D	T	K	L	M	M	E	R	A	V	A	K	G	V	A	Y	V	P	G	E	A	F	F	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure																T	T						.	.	.	.	.	.	.	.	.		S	B	S	S								T	T	.			T	T	T	T							T	T						G	G	G	G	S	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.															.																									.	.	.	.	.	.	.	.	.	.
Template SS confidence
	317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.										.	340	.	.	.	.	.	.	.	.	.	350	.	.		.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

	343	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.				.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence	A	G	M	A	P	E	A	R	A	A	A	G	I	S	E	T	L	L	R	I	S	T	G	I	.	.	.	E	D	G	E	D	L	I	A	D	L	E	N	G	F	R	A	A	N	K
Query Conservation																									.	.	.
Alig confidence	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation	.	.	.	.	.	.	.	.	.
Template Sequence	.	.	.	.	.	.	.	.	.	V	H	R	D	K	K	N	T	M	R	L	N	F	T	Y	V	P	E	E	T	I	R	E	G	V	R	R	L	A	E	T	I	K	E	E	M	K
Template Known Secondary structure	.	.	.	.	.	.	.	.	.	T	T					S							S	S	S
Template Predicted Secondary structure	.	.	.	.	.	.	.	.	.
Template SS confidence
										377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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